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Report for CCDS2329.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2329.1 Public Homo sapiens 2 MAIP1 24 110 108 CCDS HistoryNCBI Gene:79568Re-query CCDS DB by CCDS ID:2329.1Re-query CCDS DB by GeneID:79568See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2329.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000295079.6 ENSP00000295079.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000295079.6Link to Ensembl Protein Viewer:ENSP00000295079.2Re-query CCDS DB by Nucleotide ID:ENST00000295079Re-query CCDS DB by Protein ID:ENSP00000295079
Original member Current member EBI ENST00000392290.6 ENSP00000376111.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000392290.6Link to Ensembl Protein Viewer:ENSP00000376111.1Re-query CCDS DB by Nucleotide ID:ENST00000392290Re-query CCDS DB by Protein ID:ENSP00000376111
Original member Current member NCBI NM_001394955.1 NP_001381884.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001394955.1Link to Protein Sequence:NP_001381884.1Re-query CCDS DB by Nucleotide ID:NM_001394955Re-query CCDS DB by Protein ID:NP_001381884Link to BLAST:NP_001381884.1
Original member Current member NCBI NM_024520.3 NP_078796.2 Accepted alive Link to Nucleotide Sequence:NM_024520.3Link to Protein Sequence:NP_078796.2Re-query CCDS DB by Nucleotide ID:NM_024520Re-query CCDS DB by Protein ID:NP_078796Link to BLAST:NP_078796.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001381884.1 291 Q8WWC4 291 100% 0 0
NP_078796.2 291 Q8WWC4 291 100% 0 0

Chromosomal Locations for CCDS 2329.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 199955799 199956248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 199959268 199959339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 199959754 199959880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 199961781 199961928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 199963733 199963811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (876 nt):
ATGGCGCTGGCCGCTCGTTTGCTACCCCAGTTCCTGCACTCTCGGTCGCTGCCCTGCGGGGCCGTCCGAC
TCCGGACTCCTGCTGTGGCCGAGGTGAGGCTGCCGTCGGCCACACTTTGCTACTTCTGCCGCTGTCGCCT
CGGCTTGGGAGCGGCGTTATTTCCACGAAGCGCTAGGGCCTTGGCAGCCTCGGCGCTACCTGCCCAGGGC
TCCCGGTGGCCAGTGCTCAGCAGCCCGGGACTCCCCGCAGCCTTCGCTTCTTTCCCTGCCTGCCCTCAGC
GCAGCTACAGCACGGAGGAGAAGCCCCAGCAGCACCAGAAAACCAAGATGATCGTCCTGGGATTCTCCAA
CCCCATCAACTGGGTTAGGACTCGAATTAAGGCCTTCCTTATCTGGGCCTATTTCGACAAAGAGTTCAGC
ATCACAGAGTTCTCCGAGGGAGCGAAGCAGGCTTTTGCTCATGTATCCAAGTTGCTGTCACAGTGTAAAT
TTGATCTGTTGGAAGAACTTGTGGCCAAAGAGGTGCTACATGCATTGAAAGAAAAGGTTACTTCACTACC
TGACAACCATAAAAATGCCCTTGCTGCTAACATAGATGAAATTGTATTTACATCAACAGGAGACATCTCC
ATTTACTATGATGAGAAAGGAAGGAAGTTTGTTAACATCCTGATGTGCTTTTGGTATCTAACCAGTGCCA
ACATCCCCAGTGAAACTTTAAGAGGAGCCAGTGTATTCCAGGTTAAGTTGGGGAATCAGAATGTGGAAAC
TAAACAACTTCTTAGTGCAAGCTATGAGTTTCAGAGGGAGTTCACACAAGGAGTAAAGCCTGACTGGACC
ATTGCACGGATTGAACACTCAAAATTATTAGAATAA

Translation (291 aa):
MALAARLLPQFLHSRSLPCGAVRLRTPAVAEVRLPSATLCYFCRCRLGLGAALFPRSARALAASALPAQG
SRWPVLSSPGLPAAFASFPACPQRSYSTEEKPQQHQKTKMIVLGFSNPINWVRTRIKAFLIWAYFDKEFS
ITEFSEGAKQAFAHVSKLLSQCKFDLLEELVAKEVLHALKEKVTSLPDNHKNALAANIDEIVFTSTGDIS
IYYDEKGRKFVNILMCFWYLTSANIPSETLRGASVFQVKLGNQNVETKQLLSASYEFQREFTQGVKPDWT
IARIEHSKLLE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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