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Report for CCDS23376.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23376.1 Public Mus musculus 9 Elovl4 23 108 98 CCDS HistoryNCBI Gene:83603Re-query CCDS DB by CCDS ID:23376.1Re-query CCDS DB by GeneID:83603See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23376.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034796.13 ENSMUSP00000034796.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034796.13Link to Ensembl Protein Viewer:ENSMUSP00000034796.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000034796Re-query CCDS DB by Protein ID:ENSMUSP00000034796
Original member Current member NCBI NM_148941.2 NP_683743.2 Accepted alive Link to Nucleotide Sequence:NM_148941.2Link to Protein Sequence:NP_683743.2Re-query CCDS DB by Nucleotide ID:NM_148941Re-query CCDS DB by Protein ID:NP_683743Link to BLAST:NP_683743.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_683743.2 312 Q9EQC4 312 100% 0 0

Chromosomal Locations for CCDS 23376.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 83780540 83780809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 83783136 83783263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 83785035 83785206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 83788269 83788349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 83789977 83790164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 83805939 83806038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGGGGCTGCTGGACTCAGAGCCCGGCAGCGTCCTGAACGCGATGTCCACGGCATTCAACGACACCGTGG
AGTTCTATCGCTGGACCTGGACCATTGCAGATAAACGTGTAGCAGACTGGCCGCTGATGCAGTCTCCATG
GCCAACGATAAGCATAAGCACGCTCTATCTCCTGTTCGTGTGGCTGGGTCCAAAGTGGATGAAAGACCGC
GAGCCGTTCCAAATGCGCTTAGTACTCATAATCTATAATTTTGGCATGGTTTTGCTTAACCTTTTCATCT
TCAGAGAGCTATTCATGGGATCATACAACGCAGGATACAGCTATATTTGCCAGTCAGTGGATTATTCTAA
TGATGTTAATGAAGTCAGGATAGCTGGCGCCCTGTGGTGGTATTTTGTATCGAAAGGCGTTGAGTATTTG
GACACAGTGTTTTTTATCCTGAGGAAGAAAAACAACCAAGTCTCCTTCCTTCACGTGTACCACCACTGCA
CCATGTTCACTCTGTGGTGGATTGGAATCAAGTGGGTGGCTGGAGGCCAAGCGTTTTTCGGGGCCCAGAT
GAACTCTTTCATCCACGTGATCATGTACTCCTACTATGGGCTGACTGCGTTCGGCCCCTGGATCCAGAAA
TATCTTTGGTGGAAGCGATACCTGACCATGCTGCAGCTGGTCCAGTTCCACGTGACCATCGGACACACAG
CACTGTCTCTCTACACCGACTGCCCCTTCCCCAAGTGGATGCACTGGGCTCTGATCGCCTACGCCATCAG
CTTCATCTTCCTCTTCCTCAACTTCTACACTCGGACATACAATGAGCCGAAGCAGTCAAAAACCGGAAAG
ACGGCCACGAATGGTATCTCATCGAACGGCGTGAATAAATCAGAGAAAGCGTTAGAAAACGGGAAACCCC
AGAAAAACGGGAAGCCAAAAGGAGAGTAA

Translation (312 aa):
MGLLDSEPGSVLNAMSTAFNDTVEFYRWTWTIADKRVADWPLMQSPWPTISISTLYLLFVWLGPKWMKDR
EPFQMRLVLIIYNFGMVLLNLFIFRELFMGSYNAGYSYICQSVDYSNDVNEVRIAGALWWYFVSKGVEYL
DTVFFILRKKNNQVSFLHVYHHCTMFTLWWIGIKWVAGGQAFFGAQMNSFIHVIMYSYYGLTAFGPWIQK
YLWWKRYLTMLQLVQFHVTIGHTALSLYTDCPFPKWMHWALIAYAISFIFLFLNFYTRTYNEPKQSKTGK
TATNGISSNGVNKSEKALENGKPQKNGKPKGE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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