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Report for CCDS23532.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23532.2 Public Mus musculus 9 Wdr6 23 108 98 CCDS HistoryNCBI Gene:83669Re-query CCDS DB by CCDS ID:23532.2Re-query CCDS DB by GeneID:83669See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 23532.2

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000068700.6 ENSMUSP00000070927.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000068700.6Link to Ensembl Protein Viewer:ENSMUSP00000070927.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000068700Re-query CCDS DB by Protein ID:ENSMUSP00000070927
Original member NCBI NM_031392.3 NP_113569.1 Updated not alive Link to Nucleotide Sequence:NM_031392.3Link to Protein Sequence:NP_113569.1Re-query CCDS DB by Nucleotide ID:NM_031392Re-query CCDS DB by Protein ID:NP_113569
Current member NCBI NM_031392.4 NP_113569.1 Accepted alive Link to Nucleotide Sequence:NM_031392.4Link to Protein Sequence:NP_113569.1Re-query CCDS DB by Nucleotide ID:NM_031392Re-query CCDS DB by Protein ID:NP_113569Link to BLAST:NP_113569.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_113569.1 1125 Q99ME2 1125 100% 0 0

Chromosomal Locations for CCDS 23532.2

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 108572950 108573413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108573489 108573607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108573694 108573810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108573905 108574000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108574101 108576582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108578494 108578593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3378 nt):
ATGGACGCTTTCGGGGACTATGTCTGGCCGCGGGCGACTTCCGAGCTCATACTCCTCCCGGTTACGGGTC
TGGAGTGTGTTGGGGACAGGCTGCTGGCGGGCGAGGGGCCTGATTTACTGGTGTACAACTTGGACCTTGG
TGGGCATCTCCGAATGGTGAAGAGAGTCCAGAACCTGCTTGGTCACTTTCTCATCCATGGGTTCCGAGTG
CGACCAGAGCCTAAAGGAGACCTGGACTCTGAGGCCATGATAGCTGTGTTTGGGAGCAAGGGCCTCAAAG
TTGTGAAAGTCAGCTGGGGTCAAAGCCATCTTCGGGAGCTCTGGCGCTCTGGCCTGTGGAACATGTCCGA
CTGGATCTGGGATGTCCGCTGGATCGAGGGTAACGTAGCCGTGGCCTTGGGCCACAACTCGGTGGTACTG
TATGACCCAGTGATAGGGTGCATGCTGCAGGACGTCCCCTGCACAGACAGGTGTACCCTGTCCTCAGCCT
GCCTGGTTGGTGACACCTGGAAGGAACTGACCATCGTGGCTGGCGCGGTTTCCAATGAGCTCCTGATCTG
GTACCCAGCCACTGCTTTAACAGACAACAAACCCGTGGCCCCTGACCGGCGGGTTAGTGGCCATGTGGGT
GTCATCTTTAGCATGTCATACCTGGAAAGCAAGGGCCTGCTGGCAACTGCTTCAGAAGACCGAAGTGTTC
GTCTCTGGAAGGTGGGGGACCTCCGGGTGCCTGGGGGTCGGGTTCAGAATATTGGCCACTGCTTTGGGCA
CAGTGCCCGAGTGTGGCAGGTGAAGCTCTTAGAGAACTATCTCATCAGTGCAGGAGAAGACTGTGTCTGC
TTGGTGTGGAGCCACGAAGGCGAGATCCTTCAAGCCTTTCGGGGCCACCGGGGCCGAGGTATCCGGGCCA
TAGCCACTCACGAGAGGCAGGCCTGGGTGGTCACTGGGGGAGACGACTCAGGCATTCGACTCTGGCACCT
GGCAGGCCGAGGGTACCCAGGCTTGGGCGTCTCATCCCTGTCCTTCAAATCTCCTAGCCGGCCAGGTGCC
CTCAAGGCTGTGACTCTGGCTGGTTCCTGGCGAGTCCTGGCAGTGACTGATGTGGGGTCCCTGTACCTCT
ACGACCTTGAGGTCAAGTCCTGGGAGCAGCTGCTGGAGGACAATCGCTTTCGGTCTTACTGCCTGCTAGA
GGCAGCTCCTGGGCCCGAGGGCTTTGGACTCTGTGCCTTGGCCAACGGGGAGGGTCTTGTTAAGGTGGTT
CCCATCAACACCCCCACCGCTGCCGTCGAGCAGAAACTGTTCCAGGGGAAGGTGCACAGCCTGAGCTGGG
CCCTTCGTGGTTACGAGGAGCTGCTTTTGTTAGCATCGGGCCCTGGTGGGGTGATAGCTTGTTTGGAGAT
CTCAGCTGCACCCACTGGCAAGGCTATCTTTGTCAAGGAACGTTGCCGGTACCTCCTTCCCCCAAGCAAG
CAACGATGGCACACATGTAGTGCTTTCCTGCCCCCGGGTGACTTCCTCGTCTGTGGGGACCGCCGTGGCT
CTGTGATGCTATTCCCTGTCAGACCATGTCTATTCAAAAAGCCTGGGGCCGGAAGCAAGGCTATTACTGC
AGCTGAGGCACCTGGAGCTGGTAGTGGGAGCGGTGGGTCTGAGAGTGTCCCAACAGGAATAGGCCCCGTC
TCTACACTCCATTCTCTGCATGGGAAACAGGGTGTGACCTCAGTTACCTGCCATGGTGGCTACCTATACA
GCACAGGGCGGGATAGCTCCTACTTCCAGCTCTTTGTACATGGCGGCCACCTCCAGCCGGTCCTAAGGCA
GAAAGCCTGTCGAGGCATGAACTGGGTAGCTGGGCTTCGGATGGTGCCTGATGGAAGTATGGTCATCTTG
GGTTTCCATGCCAACGAGTTTGTAGTGTGGAGCCCCCGGTCCCATGAGAAGCTGCATATCGTCAACTGTG
GGGGAGGGCACCGCTCCTGGGCCTTTTCTGATACTGAGGCAGCCATGGCCTTTACCTACCTGAAGGATGG
TGAGGTCATGCTCTATCGGGCTCTAGGTGGCTGCATCCGGCCCAATGTGATTCTCCGGGAGGGTCTGCAT
GGCCGTGAAATCACATGTGTAAAGCGTGTGGGCACAGTGACCCTGGGCCCTGAATTTGAGGTACCCAACT
TGGAGCATCCTGACTCCCTGGAGCCTGGCAGTGAGGGGCCTGGTCTGATTGACATAGTGATAACAGGCAG
TGAGGACACTACTGTCTGTGTCCTAGCACTTCCCACCACCACAGGCTCAGCCCACGCCCTCACTTCTGTC
TGTAACCATATCTCCTCTGTGCGAGCCCTGGCAGTGTGGGCTGTTGGCACCCCAGGTGGCCCACAGGATA
CTCGACCAGGGCTCACTGCTCAGGTAGTGTCTGCAGGGGGCCGAGCGGAGATTCACTGCTTCAGCGTCAT
GGTCACTCCGGACGCTAGCACCCCCAGCCGCCTTGCCTGTCATGTCATGCACCTTTCATCCCACCGGCTG
GATGAGTACTGGGACCGGCAGCGGAACAAGCACAAGATGATCAAGGTGGACCCTGAGACCAGGTACATGT
CTCTTGCTATTTGTGAGCTTGACAACGATAGGCCTGGCCTCGGCCCTGGCCCCCTTGTGGCTGCAGCCTG
TAGTGATGGAGCAGTGAGGCTCTTTCTCCTGCAGGACTCTGGGCGAATTCTGCATCTCCTAGCTGAGTCT
TTCCACCACAAGCGGTGTGTCCTCAAAGTCCACTCCTTCACACATGAGGCACCTAACCAGCGTCGGAGGC
TGATCCTGTGCAGTGCAGCTACAGATGGCAGCCTAGCCTTCTGGGATCTCACCACGGCAATGGACAAAGG
CTCTACTACCCTGGAGCTTCCAGCACACCCTGGGCTTCCCTACCAGATGGGCACCCCCTCCATGACCGTG
CAAGCCCATAGCTGTGGCGTCAATAGCCTGCACACTTTGCCTACACCTGAGGGCCACCACCTTGTGGCCA
GTGGCAGTGAGGATGGGTCCCTGCATGTCTTCACACTTGCTGTGAAGATGCCAGAGCCGGAAGAAGCTGA
TGGGGAGGCTGAGCTGGTGCCCCAGTTATGTGTCCTAGAGGAATATTCCGTCCCCTGCGCACATGCTGCC
CATGTGACAGGCGTCAAGATCCTAAGTCCCAAGCTCATGGTCTCAGCCTCCATAGACCAGCGGCTGACCT
TCTGGCGTCTGGGACAGGGTGAGCCCACCTTCATGAATAGCACTGTGTACCATGTGCCAGATGTGGCCGA
CATGGACTGCTGGCCTGTGAGCCCTGAGTTTGGCCACCGCTGTGCTCTGGCAGGTCAGGGACTTGAGGTT
TACAACTGGTATGACTGA

Translation (1125 aa):
MDAFGDYVWPRATSELILLPVTGLECVGDRLLAGEGPDLLVYNLDLGGHLRMVKRVQNLLGHFLIHGFRV
RPEPKGDLDSEAMIAVFGSKGLKVVKVSWGQSHLRELWRSGLWNMSDWIWDVRWIEGNVAVALGHNSVVL
YDPVIGCMLQDVPCTDRCTLSSACLVGDTWKELTIVAGAVSNELLIWYPATALTDNKPVAPDRRVSGHVG
VIFSMSYLESKGLLATASEDRSVRLWKVGDLRVPGGRVQNIGHCFGHSARVWQVKLLENYLISAGEDCVC
LVWSHEGEILQAFRGHRGRGIRAIATHERQAWVVTGGDDSGIRLWHLAGRGYPGLGVSSLSFKSPSRPGA
LKAVTLAGSWRVLAVTDVGSLYLYDLEVKSWEQLLEDNRFRSYCLLEAAPGPEGFGLCALANGEGLVKVV
PINTPTAAVEQKLFQGKVHSLSWALRGYEELLLLASGPGGVIACLEISAAPTGKAIFVKERCRYLLPPSK
QRWHTCSAFLPPGDFLVCGDRRGSVMLFPVRPCLFKKPGAGSKAITAAEAPGAGSGSGGSESVPTGIGPV
STLHSLHGKQGVTSVTCHGGYLYSTGRDSSYFQLFVHGGHLQPVLRQKACRGMNWVAGLRMVPDGSMVIL
GFHANEFVVWSPRSHEKLHIVNCGGGHRSWAFSDTEAAMAFTYLKDGEVMLYRALGGCIRPNVILREGLH
GREITCVKRVGTVTLGPEFEVPNLEHPDSLEPGSEGPGLIDIVITGSEDTTVCVLALPTTTGSAHALTSV
CNHISSVRALAVWAVGTPGGPQDTRPGLTAQVVSAGGRAEIHCFSVMVTPDASTPSRLACHVMHLSSHRL
DEYWDRQRNKHKMIKVDPETRYMSLAICELDNDRPGLGPGPLVAAACSDGAVRLFLLQDSGRILHLLAES
FHHKRCVLKVHSFTHEAPNQRRRLILCSAATDGSLAFWDLTTAMDKGSTTLELPAHPGLPYQMGTPSMTV
QAHSCGVNSLHTLPTPEGHHLVASGSEDGSLHVFTLAVKMPEPEEADGEAELVPQLCVLEEYSVPCAHAA
HVTGVKILSPKLMVSASIDQRLTFWRLGQGEPTFMNSTVYHVPDVADMDCWPVSPEFGHRCALAGQGLEV
YNWYD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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