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Report for CCDS23567.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23567.1 Public Mus musculus 9 Klhl18 23 108 98 CCDS HistoryNCBI Gene:270201Re-query CCDS DB by CCDS ID:23567.1Re-query CCDS DB by GeneID:270201See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23567.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000068025.12 ENSMUSP00000069674.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000068025.12Link to Ensembl Protein Viewer:ENSMUSP00000069674.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000068025Re-query CCDS DB by Protein ID:ENSMUSP00000069674
Original member Current member NCBI NM_177771.5 NP_808439.2 Accepted alive Link to Nucleotide Sequence:NM_177771.5Link to Protein Sequence:NP_808439.2Re-query CCDS DB by Nucleotide ID:NM_177771Re-query CCDS DB by Protein ID:NP_808439Link to BLAST:NP_808439.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_808439.2 574 E9Q4F2 574 100% 0 0

Chromosomal Locations for CCDS 23567.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 110428631 110429017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 110429946 110430057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 110432434 110432538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 110436011 110436233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 110437347 110437483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 110438898 110439058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 110446674 110446872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 110450720 110450860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 110455357 110455487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 110476466 110476594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1725 nt):
ATGGTGGAGGACGGCGCGGAGGAGCTGGAGGACTTGGTGCATTTCTCCGTGTCGGAGTTGCCTAGTCGCG
GCTACGGCGTCATGGAGGAGATCCGGCGGCAGGGCAAGCTATGCGACGTGACGCTAAAGATTGGGGACCA
CAAGTTCAGTGCTCACCGGATCGTCTTAGCGGCCTCCATCCCGTACTTCCATGCTATGTTTACGAACGAC
ATGATGGAGTGCAAGCAGGATGAGATTGTAATGCAGGGAATGGACCCAAGTGCCCTGGAGGCTCTCATCA
ACTTTGCTTATAATGGCAACCTTGCTATCGACCAGCAGAATGTGCAGTCCCTGCTGATGGGGGCAAGCTT
CCTGCAGCTGCAGAGCATCAAAGATGCTTGCTGCACGTTCCTCCGAGAAAGGCTTCACCCCAAAAATTGC
CTGGGTGTGCGCCAGTTTGCCGAGACGATGATGTGTGCTGTGTTGTACGATGCAGCCAACAGCTTCATCC
ACCAGCACTTTGTAGAGGTGTCTCTGTCCGAAGAGTTCCTGGCCCTGCCCTTGGAAGACGTGCTTGAGCT
GGTGTCCCGGGATGAGCTGAATGTGAAGTCAGAGGAGCAGGTTTTTGAAGCTGCATTGGCCTGGGTCAGG
TATGACCGGGAGCAGAGGGGACCATGCCTGCCCGAGCTGCTGTCCAATATCCGCCTGCCTCTTTGCCGGC
CCCAGTTCTTATCAGATCGAGTGCAGCAAGATGACCTGGTACGGTGCTGTCACAAATGCAGGGACCTGGT
CGATGAAGCAAAGGACTATCATCTGATGCCAGAGCGCCGGCCCCACCTGCCAGCTTTCAGGACTCGGCCC
CGATGCTGCACGTCCATCGCTGGGCTCATCTACGCTGTGGGGGGCCTCAACTCAGCAGGTGATTCCCTGA
ATGTGGTGGAAGTGTTCGACCCTATCGCCAATCGCTGGGAAAAGTGCCATCCCATGACAACAGCCCGAAG
CCGTGTGGGTGTGGCTGTGGTGAACGGGCTCCTCTATGCTATCGGGGGATATGATGGTCAGTTGCGGCTG
AGCACCGTGGAGGCCTACAATCCTGAGACGGACACATGGACCCGAGTGGGGAGCATGAATAGCAAGCGAA
GTGCCATGGGGACAGTCGTGCTGGATGGACAGATCTACGTGTGTGGAGGCTATGACGGCAACTCCTCCCT
CAACTCTGTGGAGACCTACTCACCTGAGACGGACAAGTGGACAGTGGTGACTCCGATGAGCTCAAACCGG
AGTGCTGCTGGGGTGACAGTCTTTGAGGGCAGGATATATGTGTCAGGAGGCCACGATGGCTTGCAGATCT
TCAGCAGTGTGGAACACTACAACCACCACACGGCCACCTGGCACCCGGCAGCCAGCATGCTCAACAAGCG
CTGCCGACACGGAGCCGCCTCCCTGGGAAGCAAGATGTTTGTCTGTGGGGGCTATGATGGCTCTGGCTTC
CTCAGTATTGCTGAGATGTACAGCTCTGTGGCAGACCAGTGGTGTCTCATAGTACCCATGCACACACGCC
GGAGCCGGGTCTCCCTCGTGGCCAGCTGTGGGCGCCTCTATGCAGTGGGAGGTTACGATGGACAGTCAAA
CCTAAGCTCAGTGGAGATGTACGACCCAGAGACGGACCGCTGGACATTTATGGCCCCCATGGCATGCCAC
GAGGGGGGGGTTGGTGTGGGCTGCATCCCTCTTCTCACCATCTAA

Translation (574 aa):
MVEDGAEELEDLVHFSVSELPSRGYGVMEEIRRQGKLCDVTLKIGDHKFSAHRIVLAASIPYFHAMFTND
MMECKQDEIVMQGMDPSALEALINFAYNGNLAIDQQNVQSLLMGASFLQLQSIKDACCTFLRERLHPKNC
LGVRQFAETMMCAVLYDAANSFIHQHFVEVSLSEEFLALPLEDVLELVSRDELNVKSEEQVFEAALAWVR
YDREQRGPCLPELLSNIRLPLCRPQFLSDRVQQDDLVRCCHKCRDLVDEAKDYHLMPERRPHLPAFRTRP
RCCTSIAGLIYAVGGLNSAGDSLNVVEVFDPIANRWEKCHPMTTARSRVGVAVVNGLLYAIGGYDGQLRL
STVEAYNPETDTWTRVGSMNSKRSAMGTVVLDGQIYVCGGYDGNSSLNSVETYSPETDKWTVVTPMSSNR
SAAGVTVFEGRIYVSGGHDGLQIFSSVEHYNHHTATWHPAASMLNKRCRHGAASLGSKMFVCGGYDGSGF
LSIAEMYSSVADQWCLIVPMHTRRSRVSLVASCGRLYAVGGYDGQSNLSSVEMYDPETDRWTFMAPMACH
EGGVGVGCIPLLTI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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