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Report for CCDS23569.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23569.1 Public Mus musculus 9 Nradd 23 108 98 CCDS HistoryNCBI Gene:67169Re-query CCDS DB by CCDS ID:23569.1Re-query CCDS DB by GeneID:67169See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 23569.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000035069.13 ENSMUSP00000035069.9 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000035069.13Link to Ensembl Protein Viewer:ENSMUSP00000035069.9Re-query CCDS DB by Nucleotide ID:ENSMUST00000035069Re-query CCDS DB by Protein ID:ENSMUSP00000035069
Original member Current member NCBI NM_026012.2 NP_080288.1 Accepted alive Link to Nucleotide Sequence:NM_026012.2Link to Protein Sequence:NP_080288.1Re-query CCDS DB by Nucleotide ID:NM_026012Re-query CCDS DB by Protein ID:NP_080288Link to BLAST:NP_080288.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080288.1 228 Q8CJ26 228 100% 0 0

Chromosomal Locations for CCDS 23569.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 110621421 110621737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 110621840 110621982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 110622072 110622261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 110623087 110623123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (687 nt):
ATGCTTTATAACGTCAGCAAAGGTGTGGTCTATTCAGATACAGCCCTGCAGGGGCAGGACGGGGACAGGG
AAGGAATGTGGGTAGGAGCTGGGGGAGCCCTAGCCCCCAATACCTCCTCCCTATTTCCCCCTGAGCCTCC
AGGGGCCTCGAGCAACATCATTCCTGTCTACTGTGCTCTCCTAGCTACAGTGATCCTTGGTCTGCTGGCC
TATGTGGCCTTCAAATGCTGGCGCTCACATAAGCAAAGGCAACAGTTGGCTAAAGCTCGGACTGTAGAGC
TAGGGGACCCTGACAGGGACCAGAGGCGTGGTGACAGCAACGTCTTCGTGGACTCTCCTCCTAGTCTGGA
GCCCTGTATTCCCAGCCAGGGACCACACCCGGACCTTGGCTGCCAGCTTTACCTGCATATTCCACAGCAG
CAGCAGGAGGAAGTCCAGCGGCTCCTGATGATGGGTGAGCCAGCCAAGGGCTGGCAGGAGCTGGCAGGCC
ACCTCGGCTACCAAGCTGAGGCTGTGGAAACCATGGCCTGTGACCAAATGCCAGCCTATACCCTGCTAAG
GAACTGGGCTGCCCAAGAAGGCAATAGAGCTACCCTCAGAGTGCTGGAGGATGCTCTGGCTGCCATAGGC
CGAGAAGATGTGGTCCAGGTTTTGAGCTCGCCAGCTGAGAGCTCCTCGGTGGTGTGA

Translation (228 aa):
MLYNVSKGVVYSDTALQGQDGDREGMWVGAGGALAPNTSSLFPPEPPGASSNIIPVYCALLATVILGLLA
YVAFKCWRSHKQRQQLAKARTVELGDPDRDQRRGDSNVFVDSPPSLEPCIPSQGPHPDLGCQLYLHIPQQ
QQEEVQRLLMMGEPAKGWQELAGHLGYQAEAVETMACDQMPAYTLLRNWAAQEGNRATLRVLEDALAAIG
REDVVQVLSSPAESSSVV


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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