NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS23574.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23574.1 Public Mus musculus 9 Prss43 23 108 98 CCDS HistoryNCBI Gene:272643Re-query CCDS DB by CCDS ID:23574.1Re-query CCDS DB by GeneID:272643See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 23574.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000077549.6 ENSMUSP00000076752.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000077549.6Link to Ensembl Protein Viewer:ENSMUSP00000076752.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000077549Re-query CCDS DB by Protein ID:ENSMUSP00000076752
Original member Current member NCBI NM_199471.1 NP_955765.1 Accepted alive Link to Nucleotide Sequence:NM_199471.1Link to Protein Sequence:NP_955765.1Re-query CCDS DB by Nucleotide ID:NM_199471Re-query CCDS DB by Protein ID:NP_955765Link to BLAST:NP_955765.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_955765.1 382 Q76HL1 382 100% 0 0

Chromosomal Locations for CCDS 23574.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 110827047 110827125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 110827326 110827574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 110827756 110827915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 110828523 110828785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 110829385 110829545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 110830782 110831018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1149 nt):
ATGGGTGGCTTCTGTGGCGCGGACAGGGGCGGCTTCCTAGCCCTCCTGGTCTGGCTTCAGCTTCTTCAGC
CTTTGTTCAGTGGTACTTACAAACCCAGGGAAGATTCCGGAGTGATGCACCGGCCCCAGAGGCCCCGGAG
ACCCCGGAGTGACCCAGAGGCCCCGGCACAGCAGAGTCGCTTGAAATCCCTGAGTATTTCGCACCCTTCA
GGAGTTCCGGTGTCTGTAGACAGGACTGAGATTCCAGGATCAGGGTCTCCTTCAGGGACCACAACCAAAA
TTACCTTGGAAAACAGGAGGAGCTCTCTAGGAGGACCGTTTTTTACAGACACTTGCGGCCATAGAATTAC
AGAGGTAGATCCTGGAAGTTTATCTGCAGGGAGGAAGTGGCCTTGGCAGGTGAGTCTGCAGAGTCAAAAT
GAGCATGTTTGTGGAGGCTCCCTCATCAGCCACCGATGGGTGTTGACTGCGGCCCACTGCATATATGAGC
AGGAGGAGTACATGGTGATGTTGGGTGACGACATGCTGCATTCTGAATCTGAAAGTGTGACCCTGGTCCC
AGTCCAGGACATCATTTTCCCTTCCAACTTTGACATTCAAACCATGAGGAATGACATTGCCCTTGCTCTG
CTGTACTTCCCCGTGAATTACTCCTCGCTCATCCAGCCCGTGTGCCTTCCCGAAGAGCCCTTCCGAGTGA
AAAACGGGACAGTGTGCTGGGTGACTGGCTGGGGCCAACAGAACGAAATTGATGCAGGGTTTGCATCCAT
TCTCCTCCAGGAGGTTCAGCAACGCATTCTCCTCCAGAAGCACTGTAACACGCTGTTCCAGAGACAGCTG
GGGACATCGAAAAACCTAGTGATTAAAGGGATGATCTGCGGTCTGCAAGACTCAGGACAGAGTCTTTGTT
GGGGAGATTCTGGGAACCCCCTTGTCTGCGAATCTGACAACACGTGGACCCAGGTGGGGATCATGAGCTG
GGGCATCAACTGCAATGGAGTCCCTGTCCTCTCAGTTTACACAGACATCGCTGAGTACAATGAGTGGGTC
AGCTATGTCTTAAGTCAGGCTTCCCGTATGGATCCCATGGGAGTCTTGGTCCTATACCTGTCTCTGGTGT
TTCCCTTGGCCCTCCTGGTAGCTCTGTGA

Translation (382 aa):
MGGFCGADRGGFLALLVWLQLLQPLFSGTYKPREDSGVMHRPQRPRRPRSDPEAPAQQSRLKSLSISHPS
GVPVSVDRTEIPGSGSPSGTTTKITLENRRSSLGGPFFTDTCGHRITEVDPGSLSAGRKWPWQVSLQSQN
EHVCGGSLISHRWVLTAAHCIYEQEEYMVMLGDDMLHSESESVTLVPVQDIIFPSNFDIQTMRNDIALAL
LYFPVNYSSLIQPVCLPEEPFRVKNGTVCWVTGWGQQNEIDAGFASILLQEVQQRILLQKHCNTLFQRQL
GTSKNLVIKGMICGLQDSGQSLCWGDSGNPLVCESDNTWTQVGIMSWGINCNGVPVLSVYTDIAEYNEWV
SYVLSQASRMDPMGVLVLYLSLVFPLALLVAL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH