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Report for CCDS23934.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23934.1 Public Mus musculus 10 Mif 23 108 98 CCDS HistoryNCBI Gene:17319Re-query CCDS DB by CCDS ID:23934.1Re-query CCDS DB by GeneID:17319See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23934.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000038169.7 ENSMUSP00000041149.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000038169.7Link to Ensembl Protein Viewer:ENSMUSP00000041149.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000038169Re-query CCDS DB by Protein ID:ENSMUSP00000041149
Original member Current member NCBI NM_010798.3 NP_034928.1 Accepted alive Link to Nucleotide Sequence:NM_010798.3Link to Protein Sequence:NP_034928.1Re-query CCDS DB by Nucleotide ID:NM_010798Re-query CCDS DB by Protein ID:NP_034928Link to BLAST:NP_034928.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034928.1 115 P34884 115 100% 0 0

Chromosomal Locations for CCDS 23934.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 75859477 75859543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 75859687 75859859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 75860061 75860168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (348 nt):
ATGCCTATGTTCATCGTGAACACCAATGTTCCCCGCGCCTCCGTGCCAGAGGGGTTTCTGTCGGAGCTCA
CCCAGCAGCTGGCGCAGGCCACCGGCAAGCCCGCACAGTACATCGCAGTGCACGTGGTCCCGGACCAGCT
CATGACTTTTAGCGGCACGAACGATCCCTGCGCCCTCTGCAGCCTGCACAGCATCGGCAAGATCGGTGGT
GCCCAGAACCGCAACTACAGTAAGCTGCTGTGTGGCCTGCTGTCCGATCGCCTGCACATCAGCCCGGACC
GGGTCTACATCAACTATTACGACATGAACGCTGCCAACGTGGGCTGGAACGGTTCCACCTTCGCTTGA

Translation (115 aa):
MPMFIVNTNVPRASVPEGFLSELTQQLAQATGKPAQYIAVHVVPDQLMTFSGTNDPCALCSLHSIGKIGG
AQNRNYSKLLCGLLSDRLHISPDRVYINYYDMNAANVGWNGSTFA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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