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Report for CCDS24024.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24024.1 Public Mus musculus 10 Atp8b3 23 108 98 CCDS HistoryNCBI Gene:67331Re-query CCDS DB by CCDS ID:24024.1Re-query CCDS DB by GeneID:67331See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 24024.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000020383.5 ENSMUSP00000020383.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000020383.5Link to Ensembl Protein Viewer:ENSMUSP00000020383.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000020383Re-query CCDS DB by Protein ID:ENSMUSP00000020383
Original member Current member NCBI NM_026094.3 NP_080370.2 Accepted alive Link to Nucleotide Sequence:NM_026094.3Link to Protein Sequence:NP_080370.2Re-query CCDS DB by Nucleotide ID:NM_026094Re-query CCDS DB by Protein ID:NP_080370Link to BLAST:NP_080370.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080370.2 1335 Q6UQ17 1335 100% 0 0

Chromosomal Locations for CCDS 24024.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 80519869 80520462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80521770 80521897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80522011 80522149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80523652 80523891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80524329 80524412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80525178 80525401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80525488 80525854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80525984 80526083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80526170 80526245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80526867 80526978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80527064 80527228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80528494 80528606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80528692 80528880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80529121 80529277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80529373 80529404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80529631 80529839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80529936 80530126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80530540 80530628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80530964 80531122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80532498 80532580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80533123 80533193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80533276 80533348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80534165 80534226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80534443 80534541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80535287 80535400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80536256 80536347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80536759 80536804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4008 nt):
ATGGATGGAGTTCATCTCGGGGAGAACCTTGAGGATAAAGACACAGAGTTCACCTGGGAGGTGAAGGCCA
ATGACAGAACCTATCACAAGCAGTTCAAGAAGAAGGGCTTTCTATGCTGGAGGCAGAAGAAGTACAAGAG
CAACGCCATCCACACTGCCAAATACAACATCTTCTCCTTCCTGCCTCTGAACCTGTACGAGCAGTTCCAT
CGAATGTCCAATCTCTACTTCCTTTTTATCATCATCCTGCAGGGCATCCCCGAGATCTCCACACTGCCCT
GGTTCACGCTCTTTGCACCTCTGGTCTGCCTGTTTGTGATCCGGGCCACTCGTGATCTTGTGGATGACAT
TGGTCGACACAGGAGCGATAAGATCATCAACAACAGGCCTTGCCAGATCCTGAGGGGGAAGAGTTTCCTG
TGGAAGAAATGGAAGAATCTATGTGTGGGGGACGTGGTGTGTCTCAGCAAAGACAGCATTGTCCCGGCCG
ACTTGCTCCTGCTGGCCAGCACAGAGCCCAGTAGCCTGTGCTACGTGGAGACCGCAGACATCGACGGGGA
GACCAACTTGAAGTTCAGGCAGGCTCTGACGGTCACGCACCATGAACTTACCAGCCCGAAGAAGATGGCT
TCCTTCCAGGGTACAGTGACTTGCGAGGAACCCAACAGCCGAATGCATCATTTTGTGGGGAGTCTGGAGT
GGAACAGCAGGAAGTACCCTTTGGACATCGGGAATCTGCTTCTGCGTGGCTGCAAGATCCGCAACACAGA
CACCTGTTACGGCCTCGTCATCTATGCTGGTTTAGACACAAAGATCATGAAGAATTGTGGGAAGATTCAT
CTGAAGAGGACCAAGCTGGACCTGATGATGAACAAGCTGGTGGCCCTGATCTTCCTGTCCCTGGTAATCG
CGTCCCTGTTGCTGACGGTGGGCTTCACCTTCATGGTGAAACAGTTCAAAGCCAAGCATTACTACATGTC
ACCCACCCACGGGCGCTCGGACGCGATGGAGTCCTTCTTCATCTTCTGGGGCTTCCTCATCCTGCTCAGC
GTCATGGTGCCCATGGCCATGTTTATCATTGCGGAGTTCATCTACCTAGGCAACAGCATTTTCATTAACT
GGGACCTCAATATGTACTACGAGCCACTGGACATGCCAGCCAAGGCCCGCAGCACCAGTCTCAACGACCA
GCTGGGCCAGGTGCAGTACATCTTCTCAGACAAGACCGGGACGCTGACGCAGAACATCATGACCTTCAAG
AAGTGCTGTATCAATGGCTGCATCTATGATTCAGACGATGAACATGGGACGCTTCGAAAGCGGAACCCAT
ATGCCTGGAACCCATTCGCTGATGGCAAACTCCAGTTCTACAATAAGGAGCTGGAATCCCTGGTGCAAGG
CCGGCAGGACCGAGCGGTTCAGGAGTTTTGGCGTCTGCTGGCCATCTGCCACACCGTGATGGTACAGGAG
AAAGACAACCAGCTGCTGTACCAGGCTGCCTCCCCTGATGAGGAAGCACTGGTCACCGCTGCCCGGAACT
TTGGCTACGTATTTCTGTCTCGGACCCAGGACACCATCACACTGGTGGAGCTGGGGGAGGAACGGGTCTA
CCAGGTTCTGGCCATGATGGATTTTAACAGCGTTCGCAAACGGATGTCAGTGTTGGTCCGAAACCCAGAG
GGCTCCATCTGCCTCTACACCAAGGGTGCCGACACTGTCATCCTGGAGCGTCTCCGCAGTAAGGGTGTCA
TGGAGGCCACCACCGAGGAAGTCTTGGCTGCCTTTGCAGAGCAGACCCTGCGCACCCTGTGCCTGGCCTA
CAAGGATGTGGAGGAGGATGCCTACAAAGAATGGGAGCCGGAGCACCAGGAGGCCGCCCTCCTGCTACAG
AACCGTGCGCAGGCCCTGCACCAGGTGTATAATAAGATGGAACAGAACCTGCAGCTGCTGGGAGCCACCG
CCATTGAAGACAAACTGCAAGATGGCGTTCCTGAGACCATCAAATGCCTCAAGAAGGGGAACATTAAAAT
ATGGGTGCTGACCGGGGACAAGCCAGAGACCGCAGTGAACATCGGCTTTGCGTGCCAGCTGCTGTCGGAG
AATATGATAATTCTGGAAGATAAGGACATCAATCAAGTACTGGAAAGGTATTGGGAAGACAACGTACACC
AGAAGGCGTTCAAAATGATGACCCACCACAACATGGCCTTGGTTATCAATGGAGAATTCTTGGATCAGCT
CCTCCTGTCCTTGCGCAAGGAGCCCCGAGCCCTAGTCCAGAATGCAGTGGTGGATGAGGTCGCCCAGGAG
CCGGTTGTGTCCGCGTTAGACTTCCTCCAGAAGCGGAGGATCTCCCAGATGTGGAGAAACGCTGGCCCCT
CTCTGGGAACGTCCCACTCAGCCGACTCCAAGATCCGGGAGAGCCCAGAGGTGCAGCGGGAGAGGGCCTT
TGTAGACCTGGCCTCCAAATGCCAGGCTGTCATCTGCTGCAGGGTGACCCCCAAGCAAAAGGCCCTTGTG
GTGGCATTGGTGAAGAAATACCAGCAGGTGGTGACGCTGGCCATCGGAGATGGAGCCAACGATGTGAACA
TGATCAAGACTGCGGACATTGGTGTAGGACTGGCAGGCCAGGAGGGCATGCAGGCAGTTCAGAACAGCGA
CTACGTGCTGGCCCAGTTCTGCTACCTGCAGCGGCTGCTCCTTGTGCATGGGCGCTGGTCCTACATGCGA
GTCTGCAAGTTCCTGCGTTACTTCTTCTACAAGACAGTGGCCAGCATGATGGCCCAGATATGGTTCTCTC
TAGTCAACGGCTTCTCTGCACAGCCCCTGTATGAAGGCTGGTTCCTGGCTCTCTTTAACCTGCTGTATTC
CACGCTTCCAGTCCTGTATATTGGCCTGTTTGAGCAGGATGTGACCGCAGAGAAGAGCCTAAAGATGCCG
GAGTTGTACATGGCCGGCCAGAAAGGCGAGCTGTTCAACTACAGCATTTTCATGCAAGCCATCACCCACG
GCACCATCACATCCATGATCAACTTCTTTGTAACGGTTATGGTCAGCTCTGACATGTCCAAGGCTGGCAG
CTCCCACGACTACCAGTCCTTAGGGGTATTGGTGGCCATATCTAGCCTACTGTCAGTCACCCTGGAGGTC
ATGCTTGTGGTAAAGTACTGGACACTCCTGTTTGTGGGCGCAGTCGTGCTCAGCCTCAGCTCCTATGTCC
TCATGACCAGCCTCACTCAGAGTCTATGGATGTACAGGATCTCGCCAAAGACCTTCCCATTTCTGTTTGC
TGACTACAACGTGCTCTTCGAGCCTTGCAGTCTGCTGTTGATTGTACTCAATGTGGCCCTGAACGTTCTG
CCCATGCTGGCTTTGCGCACAATCCATAGAACTGTCTTGAAACAGCGCCCTAAGGGGGAAGAGGAGGCCC
CGAGTGAAGAAGTAGCCGTGGAGCCGGCCATGAGGCATCTTCGCCGTGGCATCCCAGCTCGCCGTTCCAG
CTATGCCTTCTCCCACCGTGAGGGCTACGCAAACCTCATCACCCAGGGCACCATCCTGCGCAGGCAAACG
CACGTGGATGATTCCGATGGGGGCACAGTCTGTGAATCCCTGAACCCACCCGAAGAAGACATTCCCTTGC
AAAACAAAGATTCAGTATTTAATCCGCGGAAGATCTCCATCCTGGCCAAGAAGAGACGTCATTTCTTTGG
AAAGGGGTCCCAGGAAGAGGTCCACCCCAACACTAGCTCCCAGACCATGGAGAAACAGCCCACCATTCAC
AGAGACTCTGAGACCCAGAAGCTACCCACCACCACAAGTGCCACGTCGGGGAAGCTGCTGCCGTCCGCAT
CCGAGGATGAGGCTTTCTACAGTGTGGCTTCACAGTACACTCTGGCAAGCCAGCCAAAACACACGGATGT
CCACTCCTCATTCTGGAAGAGCCCCCTCTGGAGGGATTCAGCCTCTTCTAGTCCGAGCCAGCTGGAAGTC
CCCAGAAAGCAAAGTTGA

Translation (1335 aa):
MDGVHLGENLEDKDTEFTWEVKANDRTYHKQFKKKGFLCWRQKKYKSNAIHTAKYNIFSFLPLNLYEQFH
RMSNLYFLFIIILQGIPEISTLPWFTLFAPLVCLFVIRATRDLVDDIGRHRSDKIINNRPCQILRGKSFL
WKKWKNLCVGDVVCLSKDSIVPADLLLLASTEPSSLCYVETADIDGETNLKFRQALTVTHHELTSPKKMA
SFQGTVTCEEPNSRMHHFVGSLEWNSRKYPLDIGNLLLRGCKIRNTDTCYGLVIYAGLDTKIMKNCGKIH
LKRTKLDLMMNKLVALIFLSLVIASLLLTVGFTFMVKQFKAKHYYMSPTHGRSDAMESFFIFWGFLILLS
VMVPMAMFIIAEFIYLGNSIFINWDLNMYYEPLDMPAKARSTSLNDQLGQVQYIFSDKTGTLTQNIMTFK
KCCINGCIYDSDDEHGTLRKRNPYAWNPFADGKLQFYNKELESLVQGRQDRAVQEFWRLLAICHTVMVQE
KDNQLLYQAASPDEEALVTAARNFGYVFLSRTQDTITLVELGEERVYQVLAMMDFNSVRKRMSVLVRNPE
GSICLYTKGADTVILERLRSKGVMEATTEEVLAAFAEQTLRTLCLAYKDVEEDAYKEWEPEHQEAALLLQ
NRAQALHQVYNKMEQNLQLLGATAIEDKLQDGVPETIKCLKKGNIKIWVLTGDKPETAVNIGFACQLLSE
NMIILEDKDINQVLERYWEDNVHQKAFKMMTHHNMALVINGEFLDQLLLSLRKEPRALVQNAVVDEVAQE
PVVSALDFLQKRRISQMWRNAGPSLGTSHSADSKIRESPEVQRERAFVDLASKCQAVICCRVTPKQKALV
VALVKKYQQVVTLAIGDGANDVNMIKTADIGVGLAGQEGMQAVQNSDYVLAQFCYLQRLLLVHGRWSYMR
VCKFLRYFFYKTVASMMAQIWFSLVNGFSAQPLYEGWFLALFNLLYSTLPVLYIGLFEQDVTAEKSLKMP
ELYMAGQKGELFNYSIFMQAITHGTITSMINFFVTVMVSSDMSKAGSSHDYQSLGVLVAISSLLSVTLEV
MLVVKYWTLLFVGAVVLSLSSYVLMTSLTQSLWMYRISPKTFPFLFADYNVLFEPCSLLLIVLNVALNVL
PMLALRTIHRTVLKQRPKGEEEAPSEEVAVEPAMRHLRRGIPARRSSYAFSHREGYANLITQGTILRRQT
HVDDSDGGTVCESLNPPEEDIPLQNKDSVFNPRKISILAKKRRHFFGKGSQEEVHPNTSSQTMEKQPTIH
RDSETQKLPTTTSATSGKLLPSASEDEAFYSVASQYTLASQPKHTDVHSSFWKSPLWRDSASSSPSQLEV
PRKQS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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