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Report for CCDS24201.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24201.1 Public Mus musculus 10 Dyrk2 23 108 98 CCDS HistoryNCBI Gene:69181Re-query CCDS DB by CCDS ID:24201.1Re-query CCDS DB by GeneID:69181See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 24201.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000004281.9 ENSMUSP00000004281.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000004281.9Link to Ensembl Protein Viewer:ENSMUSP00000004281.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000004281Re-query CCDS DB by Protein ID:ENSMUSP00000004281
Original member Current member NCBI NM_001014390.2 NP_001014412.1 Accepted alive Link to Nucleotide Sequence:NM_001014390.2Link to Protein Sequence:NP_001014412.1Re-query CCDS DB by Nucleotide ID:NM_001014390Re-query CCDS DB by Protein ID:NP_001014412Link to BLAST:NP_001014412.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001014412.1 599 Q5U4C9 599 100% 0 0

Chromosomal Locations for CCDS 24201.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 118859552 118861153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 118868150 118868298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 118868721 118868769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1800 nt):
ATGTTAACCAGGAAACCTTCGGCCGCCGCTCCCGCCGCCTACCCGACCGGCCGAGGAGGGGACACCGCCG
TTCGCCAGCTTCAGGCTTCCCCGGGGATCGGCGCGGGGGCTCCCCGAAGCGGAGTGGGGACCGGCCCGCC
CTCCCCCATCGCCCTGCCGCCTCTCCGGGCCAGCAACGCTACCACTACAGCCCACACGATTGGCGGCAGT
AAGCACACCATGAATGACCACCTCCACCTCAACAGCCACGGACAGATCCAGGTTCAGCAGCTGTTCGAGG
ATAATAGTAACAAAAGGACAGTGCTCACAACACAGCCCAATGGGCTTACGACGGTGGGCAAGACAGGCTT
GCCTGGGGTGCCCGAGCGGCAGCTGGAGAGCATTCACCGACGGCAGGGCAGCTCCACCTCTCTGAAGTCC
ATGGAAGGCATGGGGAAGGTAAAAGCCTCCCCCATGACGCCCGAACAAGCGATGAAGCAATACATGCAAA
AACTCACAGCCTTCGAACACCATGAGATTTTTAGCTACCCTGAAATATACTTCTTGGGTCCAAATGCAAA
GAAACGCCAAGGCATGACCGGTGGACCCAACAATGGTGGTTATGACGACGACCAGGGATCGTACGTGCAG
GTGCCCCATGATCACGTGGCTTACAGGTACGAGGTCCTCAAGGTCATCGGGAAGGGGAGCTTTGGGCAGG
TGGTCAAGGCCTATGACCACAAAGTCCACCAGCACGTGGCCCTGAAGATGGTGCGGAACGAGAAGCGCTT
CCACAGGCAGGCGGCCGAGGAGATCCGGATCTTGGAACACCTACGGAAGCAGGACAAGGACAACACTATG
AACGTCATCCACATGCTGGAGAACTTCACCTTCCGCAACCACATCTGCATGACGTTCGAGTTGCTGAGCA
TGAACCTCTATGAGCTCATCAAGAAGAATAAGTTCCAGGGCTTCAGCCTGCCTCTGGTGCGCAAGTTTGC
CCACTCCATTCTGCAGTGCTTGGATGCTTTGCACAAGAACAGAATAATCCACTGTGACCTTAAGCCCGAG
AACATTTTGTTAAAGCAGCAGGGTCGAAGCAGTATTAAAGTGATTGACTTTGGCTCCAGTTGTTACGAGC
ACCAACGCGTCTACACGTACATCCAGTCACGCTTTTACCGGGCTCCGGAAGTGATCCTCGGAGCCAGGTA
TGGCATGCCCATAGACATGTGGAGCCTGGGTTGCATCCTCGCGGAACTCCTGACGGGTTACCCCCTCTTG
CCTGGGGAGGATGAAGGGGACCAGCTGGCTTGTATGATCGAGCTTTTGGGCATGCCCTCTCAGAAACTCC
TGGATGCTTCCAAACGAGCCAAAAATTTCGTGAGCTCCAAGGGTTACCCCCGATACTGCACAGTTACGAC
TCTTTCAGATGGCTCTGTGGTCCTCAACGGGGGCCGATCCCGGAGAGGGAAACTAAGGGGTCCGCCAGAG
AGCAGAGAGTGGGGGAACGCACTGAAGGGATGCGATGACCCTCTTTTCCTTGACTTCTTAAAACAGTGTT
TGGAGTGGGATCCCGCGGTCCGCATGACCCCGGGCCAGGCTTTGCGGCACCCGTGGCTTAGGAGGCGCTT
GCCAAAGCCTCCGACCGGAGAGAAGACAGCGGTGAAGAGGGTCACAGAGAGTACTGGTGCTATCACCTCC
ATTTCCAAGTTACCTCCACCCTCCAGTTCAGCTTCCAAGCTGAGGACTAACTTGGCACAGATGACAGATG
CCAATGGGAATATTCAGCAGAGGACAGTGTTGCCGAAACTCGTTAGCTGA

Translation (599 aa):
MLTRKPSAAAPAAYPTGRGGDTAVRQLQASPGIGAGAPRSGVGTGPPSPIALPPLRASNATTTAHTIGGS
KHTMNDHLHLNSHGQIQVQQLFEDNSNKRTVLTTQPNGLTTVGKTGLPGVPERQLESIHRRQGSSTSLKS
MEGMGKVKASPMTPEQAMKQYMQKLTAFEHHEIFSYPEIYFLGPNAKKRQGMTGGPNNGGYDDDQGSYVQ
VPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTM
NVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPE
NILLKQQGRSSIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLL
PGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPE
SREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLPKPPTGEKTAVKRVTESTGAITS
ISKLPPPSSSASKLRTNLAQMTDANGNIQQRTVLPKLVS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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