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Report for CCDS24220.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24220.1 Public Mus musculus 10 Atp23 23 108 98 CCDS HistoryNCBI Gene:68876Re-query CCDS DB by CCDS ID:24220.1Re-query CCDS DB by GeneID:68876See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24220.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000026504.12 ENSMUSP00000026504.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000026504.12Link to Ensembl Protein Viewer:ENSMUSP00000026504.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000026504Re-query CCDS DB by Protein ID:ENSMUSP00000026504
Original member Current member NCBI NM_026858.3 NP_081134.2 Accepted alive Link to Nucleotide Sequence:NM_026858.3Link to Protein Sequence:NP_081134.2Re-query CCDS DB by Nucleotide ID:NM_026858Re-query CCDS DB by Protein ID:NP_081134Link to BLAST:NP_081134.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081134.2 201 Q9CWQ3 201 100% 0 0

Chromosomal Locations for CCDS 24220.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 126868657 126868725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 126891640 126891723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 126894225 126894362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 126898887 126898968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 126899581 126899626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 126901102 126901288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (606 nt):
ATGGCAGGAGCTCCGGGCGGCGGCGAGCTCGGCCCTGCGGCTGGCGAGCCACTGCTGCAGCGACCCGACT
CTGGCCAGGGCTCGCCTGAGCCGCCGGCCCACGGGAAGCCCCAGCAGGGCTTCCTCTCCAGCCTCTTCAC
CCGGGACCAGAGTTGTCCGCTCATGCTCCAGAAGACGCTGGATACCAATCCATATGTCAAACTTCTACTT
GATGCTATGAAACACTCAGGTTGTGCTGTGAACAGGGGAAGACACTTTTCCTGCGAAGTCTGCGATGGAA
ACGTCAGCGGAGGCTTTGATGCGTCTACGTCTCAGATTGTTTTGTGCGAGAATAACATCCGGAATCAGGC
GCACATGGGCAGGGTCGTCACCCACGAGCTCATTCACGCGTTTGACCACTGCCGGGCTCACGTCCACTGG
TTCACCAACATCAGACATCTGGCGTGCTCGGAGATTCGAGCCGCAAGCCTCAGCGGGGACTGCTCCCTTG
TGAACGAACTCTTCAGGCTGCGTTTTGGATTAAAGCAACATCATCAGATAGAGACTAGCTGTGTATCCAG
ACCTGCTATGAATTCACAATCCTGCCTCGGTCTCGTGAGTGCGTAG

Translation (201 aa):
MAGAPGGGELGPAAGEPLLQRPDSGQGSPEPPAHGKPQQGFLSSLFTRDQSCPLMLQKTLDTNPYVKLLL
DAMKHSGCAVNRGRHFSCEVCDGNVSGGFDASTSQIVLCENNIRNQAHMGRVVTHELIHAFDHCRAHVHW
FTNIRHLACSEIRAASLSGDCSLVNELFRLRFGLKQHHQIETSCVSRPAMNSQSCLGLVSA


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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