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Report for CCDS24328.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24328.1 Public Mus musculus 10 Or6c211 23 108 98 CCDS HistoryNCBI Gene:258282Re-query CCDS DB by CCDS ID:24328.1Re-query CCDS DB by GeneID:258282See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 24328.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000072063.2 ENSMUSP00000071941.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000072063.2Link to Ensembl Protein Viewer:ENSMUSP00000071941.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000072063Re-query CCDS DB by Protein ID:ENSMUSP00000071941
Original member Current member EBI ENSMUST00000213294.1 ENSMUSP00000148943.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000213294.1Link to Ensembl Protein Viewer:ENSMUSP00000148943.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000213294Re-query CCDS DB by Protein ID:ENSMUSP00000148943
Original member Current member EBI ENSMUST00000216067.2 ENSMUSP00000149555.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000216067.2Link to Ensembl Protein Viewer:ENSMUSP00000149555.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000216067Re-query CCDS DB by Protein ID:ENSMUSP00000149555
Original member Current member NCBI NM_146285.1 NP_666397.1 Accepted alive Link to Nucleotide Sequence:NM_146285.1Link to Protein Sequence:NP_666397.1Re-query CCDS DB by Nucleotide ID:NM_146285Re-query CCDS DB by Protein ID:NP_666397Link to BLAST:NP_666397.1

Chromosomal Locations for CCDS 24328.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 129669561 129670517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (957 nt):
ATGAAGAACCAATCTGTAGAGATTATATTCATTTTACTTGGACTGACAGATGACCCTCAGCTACAAATTC
TGATTTTCCTGTTTCTGTTTTTCAATTACATCTTGAGCCTGATGGGAAACTTAGTGATCATCCTTCTCAC
CCTGCTGGATCCTCGCCTCAAGACTCCAATGTACTTCTTCCTCCGGAATTTCTCCTTCTTAGAAATTGCA
TTCACAACTGCCTGTATTCCACGGTTCTTGATGAGCATTCTCACTGGAGACAGAACAATTTCCTACAATG
CTTGTGCAGCTCAGTTCTTCTTCTTTTCTCTATTACTAGTCACAGAGTTCTACCTCCTGGCTGCCATGTC
CTATGACCGATATGTAGCCATCTGCAGACCACTGCACTACCCCATCATCATGAACAACAGAATGTGTCAC
CTACTGGTCCTCAGCTGCTGGGTGACTGGGTTCTTAATCATCTTACCCCCTTTAGTGTTGGGACTCAAAC
TGGATTTCTGTGCCTCTAAAACAATAGACCACTTCCTGTGTGACACTTCTCCTCTCCTGCAACTGTCTTG
TACAGACACACATTTCATGGAATTGATGGCTTTTGTCATAGCTCTCATGACACTTGTCATCACCTTGATC
TTAGTTATTCTTTCCTACACACTCATTATCAAAACCATCCTAAAGTTCCCTTCAGCTCAACAAAGGAAAA
AGGCCTTTTCCACCTGCTCCTCACACATGGTTGTTGTCTCCATTACTTATGGGAGTTGTATCTTCATGTA
CATGAAAACATCAGCCAAGGAGAGGGTAGCTTTAAATAAAGGTGTCTCTGTACTCAACACCTCTGTGGCA
CCTTTGCTAAACCCTTTCATTTACACCCTAAGGAACCAGCAGGTAAAGGATGCTTTTAAGCAGGTGCTTC
ACCGACTGTATTCTCACAACAGTGAATTAAGATTTAGACCTAAATAG

Translation (318 aa):
MKNQSVEIIFILLGLTDDPQLQILIFLFLFFNYILSLMGNLVIILLTLLDPRLKTPMYFFLRNFSFLEIA
FTTACIPRFLMSILTGDRTISYNACAAQFFFFSLLLVTEFYLLAAMSYDRYVAICRPLHYPIIMNNRMCH
LLVLSCWVTGFLIILPPLVLGLKLDFCASKTIDHFLCDTSPLLQLSCTDTHFMELMAFVIALMTLVITLI
LVILSYTLIIKTILKFPSAQQRKKAFSTCSSHMVVVSITYGSCIFMYMKTSAKERVALNKGVSVLNTSVA
PLLNPFIYTLRNQQVKDAFKQVLHRLYSHNSELRFRPK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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