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Report for CCDS25756.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
25756.1 Public Mus musculus 11 Cbr2 23 108 98 CCDS HistoryNCBI Gene:12409Re-query CCDS DB by CCDS ID:25756.1Re-query CCDS DB by GeneID:12409See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 25756.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000026148.8 ENSMUSP00000026148.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000026148.8Link to Ensembl Protein Viewer:ENSMUSP00000026148.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000026148Re-query CCDS DB by Protein ID:ENSMUSP00000026148
Original member NCBI NM_007621.2 NP_031647.1 Updated not alive Link to Nucleotide Sequence:NM_007621.2Link to Protein Sequence:NP_031647.1Re-query CCDS DB by Nucleotide ID:NM_007621Re-query CCDS DB by Protein ID:NP_031647
Current member NCBI NM_007621.3 NP_031647.1 Accepted alive Link to Nucleotide Sequence:NM_007621.3Link to Protein Sequence:NP_031647.1Re-query CCDS DB by Nucleotide ID:NM_007621Re-query CCDS DB by Protein ID:NP_031647Link to BLAST:NP_031647.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031647.1 244 P08074 244 100% 0 0

Chromosomal Locations for CCDS 25756.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 120729722 120729825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 120729915 120730032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 120730257 120730321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 120730424 120730523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 120730618 120730660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 120730745 120730899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 120731006 120731103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 120731921 120731972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (735 nt):
ATGAAGCTGAATTTCAGTGGCCTGAGGGCCCTGGTGACAGGGGCAGGGAAAGGGATTGGACGGGACACTG
TGAAGGCCCTGCACGCCTCAGGAGCCAAAGTGGTGGCGGTGACTCGGACCAACTCAGACCTGGTCAGCCT
TGCCAAAGAGTGTCCCGGAATAGAGCCCGTGTGTGTGGACCTGGGTGACTGGGATGCCACAGAGAAGGCG
CTGGGCGGTATCGGCCCTGTGGACTTACTGGTGAACAATGCAGCGCTGGTTATAATGCAGCCCTTCCTGG
AAGTTACCAAGGAAGCCTTTGACAGGTCCTTCAGTGTAAATCTTCGCTCTGTGTTTCAGGTATCCCAGAT
GGTAGCCAGGGACATGATTAACCGTGGCGTGCCAGGGTCCATTGTCAATGTCTCCAGCATGGTGGCCCAT
GTCACCTTTCCTAACTTGATCACCTACAGCTCCACCAAGGGAGCGATGACTATGCTGACCAAAGCCATGG
CCATGGAACTAGGGCCACACAAGATCCGGGTAAACTCCGTAAACCCCACTGTGGTGCTGACTGACATGGG
CAAGAAAGTCTCTGCAGACCCTGAGTTTGCCAGGAAGCTCAAGGAGCGCCACCCACTGAGGAAGTTCGCA
GAGGTTGAAGACGTCGTCAACAGCATCCTCTTCCTGCTCAGCGACAGAAGTGCCTCTACCAGTGGCGGTG
GCATCCTGGTGGATGCTGGCTACCTGGCCTCCTAG

Translation (244 aa):
MKLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKA
LGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAH
VTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFA
EVEDVVNSILFLLSDRSASTSGGGILVDAGYLAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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