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Report for CCDS25808.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
25808.1 Public Mus musculus 12 Ttc32 23 108 98 CCDS HistoryNCBI Gene:75516Re-query CCDS DB by CCDS ID:25808.1Re-query CCDS DB by GeneID:75516See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 25808.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000085741.1 ENSMUSP00000082891.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000085741.1Link to Ensembl Protein Viewer:ENSMUSP00000082891.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000085741Re-query CCDS DB by Protein ID:ENSMUSP00000082891
Original member Current member NCBI NM_029321.2 NP_083597.1 Accepted alive Link to Nucleotide Sequence:NM_029321.2Link to Protein Sequence:NP_083597.1Re-query CCDS DB by Nucleotide ID:NM_029321Re-query CCDS DB by Protein ID:NP_083597Link to BLAST:NP_083597.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083597.1 148 Q9DAC7 148 100% 0 0

Chromosomal Locations for CCDS 25808.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 9030057 9030196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 9034922 9035088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 9035762 9035901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (447 nt):
ATGGCCTTGCGGCCAGGCCGAGAGGGCGGAGAGAGCTCGGCCGCCCTGGCCACGGCGCAGGCTCGCTTCT
CCAGGGGCGAGTTTGCCGAGGCCCGGGAGCTGTACTCCGCCTTCATTGGCCAGTGCGCGCGTCACGGGAG
CAAATGTAGCCCTGAGGATTTGGCCACTGCATATAACAACAGGGGGCAAACCAAGTACTTCAGCGTTGAT
TTTTATGAAGCCATGGACGACTACACATCTGCCATAGAAATCCTGCCCAGCTTTGAAGTTCCCTATTATA
ACAGAGGCCTGATACGCTACAGGCTGGGGTATTTTGACGAAGCTTTGGAAGATTTCAAGAAGGCACTAGA
CCTCAATCCTGGATTTCAAGATGCTGTTTTGAGCTTAAAACAGACCATTTTAGACAAAGAAGAAAAGCAA
AGACGAAATGCCGAGAAAAGTTACTGA

Translation (148 aa):
MALRPGREGGESSAALATAQARFSRGEFAEARELYSAFIGQCARHGSKCSPEDLATAYNNRGQTKYFSVD
FYEAMDDYTSAIEILPSFEVPYYNRGLIRYRLGYFDEALEDFKKALDLNPGFQDAVLSLKQTILDKEEKQ
RRNAEKSY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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