NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS26094.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26094.1 Public Mus musculus 12 Flrt2 23 108 98 CCDS HistoryNCBI Gene:399558Re-query CCDS DB by CCDS ID:26094.1Re-query CCDS DB by GeneID:399558See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26094.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000057324.3 ENSMUSP00000062171.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000057324.3Link to Ensembl Protein Viewer:ENSMUSP00000062171.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000057324Re-query CCDS DB by Protein ID:ENSMUSP00000062171
Original member Current member EBI ENSMUST00000110117.1 ENSMUSP00000105744.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000110117.1Link to Ensembl Protein Viewer:ENSMUSP00000105744.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000110117Re-query CCDS DB by Protein ID:ENSMUSP00000105744
Original member Current member NCBI NM_201518.4 NP_958926.1 Accepted alive Link to Nucleotide Sequence:NM_201518.4Link to Protein Sequence:NP_958926.1Re-query CCDS DB by Nucleotide ID:NM_201518Re-query CCDS DB by Protein ID:NP_958926Link to BLAST:NP_958926.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_958926.1 660 Q8BLU0 660 100% 0 0

Chromosomal Locations for CCDS 26094.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 95778890 95780872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1983 nt):
ATGGGCCTACAGACTACAAAGTGGCCCGGCCGTGGGGCTTTCATCCTCAAATTTTGGCTCATCATTTCCC
TGGGACTCTACTTACAAGTGTCAAAACTCCTGGCCTGCCCTAGTGTATGCCGCTGTGACAGGAACTTTGT
CTACTGTAACGAGAGAAGCTTGACCTCAGTGCCTCTTGGGATCCCGGAGGGCGTAACCGTACTCTACCTC
CACAACAACCAAATTAATAATGCTGGCTTTCCTGCAGAGCTGCACAATGTCCAGTCAGTGCACACTGTCT
ACCTTTATGGCAACCAGTTGGATGAGTTCCCCATGAACCTTCCCAAGAATGTCAGAGTTCTCCATCTGCA
GGAAAACAACATTCAGACCATCTCGCGGGCTGCTCTCGCTCAGCTCCTCAAGCTGGAAGAACTCCACCTG
GACGACAACTCCATATCTACAGTGGGAGTAGAAGACGGAGCGTTCCGGGAGGCGATTAGCCTCAAACTGT
TGTTTTTATCGAAGAATCACCTGAGTAGCGTGCCTGTTGGGCTTCCTGTAGACTTGCAAGAGCTGAGAGT
GGATGAAAACCGAATTGCCGTCATATCAGACATGGCCTTTCAGAACCTCACAAGCTTGGAGCGCCTGATC
GTGGATGGGAATCTTCTGACCAACAAGGGCATTGCTGAGGGTACCTTCAGTCATCTCACCAAGCTCAAGG
AATTTTCTATAGTCCGGAACTCGCTCTCCCACCCACCTCCTGATCTCCCAGGTACGCATCTGATCAGGCT
CTACTTGCAGGATAACCAGATAAACCATATCCCATTGACAGCCTTCGCAAACCTCCGTAAGCTGGAAAGG
CTAGATATATCCAACAACCAGCTACGAATGTTAACTCAAGGAGTCTTCGATCATCTCTCCAACCTGAAAC
AACTCACTGCGCGGAATAACCCTTGGTTTTGTGACTGCAGCATTAAATGGGTCACAGAATGGCTCAAGTA
TATCCCTTCTTCTCTCAACGTGCGTGGTTTCATGTGCCAAGGTCCTGAGCAAGTCCGCGGGATGGCTGTC
AGGGAGTTGAATATGAATCTTTTGTCTTGTCCCACCACGACTCCTGGCCTACCTGTCTTTACCCCAGCTC
CAAGTACCGTTTCTCCAACAACTCAGTCTCCTACTCTCTCTGTTCCAAGCCCCAGCAGAGGCTCTGTGCC
TCCAGCTCCTACCCCATCGAAACTTCCCACCATCCCTGATTGGGATGGCAGAGAAAGAGTGACCCCACCT
ATTTCTGAAAGGATCCAACTTTCCATCCACTTTGTTAATGATACTTCGATTCAAGTCAGCTGGCTGTCTC
TCTTTACTGTGATGGCCTACAAACTGACATGGGTGAAAATGGGCCACAGTCTCGTAGGGGGCATCGTTCA
GGAACGAATTGTCAGTGGTGAGAAGCAACACCTGAGCTTGGTTAATTTAGAGCCCAGATCCACGTATAGG
ATTTGTTTAGTGCCGCTGGATGCGTTCAACTACCGCACTGTGGAAGATACCATCTGTTCGGAGGCTACCA
CCCATGCCTCTTATTTGAACAACGGCAGCAACACTGCTTCTAGCCATGAGCAGACGACTTCCCACAGTAT
GGGCTCCCCTTTTCTGCTCGCAGGCTTGATTGGGGGCGCAGTGATTTTTGTGCTCGTTGTCTTGCTCAGC
GTCTTTTGCTGGCACATGCACAAAAAGGGACGCTACACCTCCCAGAAGTGGAAATACAACCGGGGCCGAC
GGAAAGACGACTATTGTGAAGCGGGTACCAAAAAAGACAACTCCATCTTGGAGATGACAGAAACAAGTTT
TCAGATTGTCTCCTTAAATAACGATCAGCTCCTTAAAGGAGATTTCAGACTGCAGCCCATTTATACCCCA
AATGGGGGCATTAATTACACAGACTGCCACATCCCCAACAACATGAGATACTGCAACAGCAGTGTGCCAG
ATCTAGAGCATTGCCATACGTAA

Translation (660 aa):
MGLQTTKWPGRGAFILKFWLIISLGLYLQVSKLLACPSVCRCDRNFVYCNERSLTSVPLGIPEGVTVLYL
HNNQINNAGFPAELHNVQSVHTVYLYGNQLDEFPMNLPKNVRVLHLQENNIQTISRAALAQLLKLEELHL
DDNSISTVGVEDGAFREAISLKLLFLSKNHLSSVPVGLPVDLQELRVDENRIAVISDMAFQNLTSLERLI
VDGNLLTNKGIAEGTFSHLTKLKEFSIVRNSLSHPPPDLPGTHLIRLYLQDNQINHIPLTAFANLRKLER
LDISNNQLRMLTQGVFDHLSNLKQLTARNNPWFCDCSIKWVTEWLKYIPSSLNVRGFMCQGPEQVRGMAV
RELNMNLLSCPTTTPGLPVFTPAPSTVSPTTQSPTLSVPSPSRGSVPPAPTPSKLPTIPDWDGRERVTPP
ISERIQLSIHFVNDTSIQVSWLSLFTVMAYKLTWVKMGHSLVGGIVQERIVSGEKQHLSLVNLEPRSTYR
ICLVPLDAFNYRTVEDTICSEATTHASYLNNGSNTASSHEQTTSHSMGSPFLLAGLIGGAVIFVLVVLLS
VFCWHMHKKGRYTSQKWKYNRGRRKDDYCEAGTKKDNSILEMTETSFQIVSLNNDQLLKGDFRLQPIYTP
NGGINYTDCHIPNNMRYCNSSVPDLEHCHT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH