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Report for CCDS26199.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26199.1 Public Mus musculus 12 Gpr132 23 108 98 CCDS HistoryNCBI Gene:56696Re-query CCDS DB by CCDS ID:26199.1Re-query CCDS DB by GeneID:56696See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 26199.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000021729.8 ENSMUSP00000021729.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000021729.8Link to Ensembl Protein Viewer:ENSMUSP00000021729.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000021729Re-query CCDS DB by Protein ID:ENSMUSP00000021729
Original member Current member NCBI NM_019925.4 NP_064309.1 Accepted alive Link to Nucleotide Sequence:NM_019925.4Link to Protein Sequence:NP_064309.1Re-query CCDS DB by Nucleotide ID:NM_019925Re-query CCDS DB by Protein ID:NP_064309Link to BLAST:NP_064309.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_064309.1 382 Q9Z282 382 100% 0 0

Chromosomal Locations for CCDS 26199.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 112852056 112853176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112855815 112855842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1149 nt):
ATGAGATCAGAACCTACCAATGCAGCAGGAAACACCACACTGGGGGTTACCTCCGTTCTTCAGAGCACCT
CAGTACCTTCTTCTGAGACCTGCCACGTCTCCTACGAGGAGAGCAGAGTGGTCCTGGTGGTGGTGTACAG
TGCCGTGTGCCTGCTGGGCCTACCAGCCAACTGCCTGACTGCCTGGCTGACGCTGCTGCAAGTCCTGCAG
AGGAACGTGCTAGCCGTCTACCTGTTCTGCCTGTCCCTCTGTGAGCTGCTCTACATCAGCACGGTGCCAT
TGTGGATCATCTACATCCAGAATCAGCACAAATGGAACCTGGGTCCGCAGGCCTGCAAGGTGACTGCTTA
CATCTTCTTCTGCAACATCTACATCAGCATCCTCTTGCTCTGCTGCATTTCCTGCGACCGCTACATGGCC
GTGGTCTATGCACTGGAGAGCCGAGGCCACCGCCACCAGAGGACTGCTGTCACCATTTCTGCGTGTGTGA
TTCTTCTTGTTGGACTTGTTAACTATCCAGTGTTTGACATGAAGGTGGAGAAGAGTTTCTGCTTTGAGCC
CCTGAGGATGAACAGCAAGATAGCCGGCTACCACTACCTGCGTTTCACCTTTGGCTTTGCCATCCCTCTC
GGCATCCTGGCGTTCACCAATCACCAGATCTTCCGGAGCATCAAACTCAGTGACAGCCTGAGCGCTGCGC
AGAAGAACAAGGTGAAGCGCTCCGCCATCGCGGTCGTCACCATCTTCCTGGTCTGCTTTGCTCCCTACCA
CGTGGTACTCCTCGTCAAAGCTGCCAGCTTTTCCTTCTACCAAGGAGACATGGATGCCGTGTGTGCCTTT
GAAAGCAGACTGTACACAGTCTCTATGGTGTTTCTGTGCCTGTCTACAGTCAACAGTGTGGCTGACCCCA
TCATCTACGTGCTGGGTACAGACCACTCTCGGCAAGAAGTGTCCAGAATCCACACAGGGTGGAAAAAGTG
GTCCACAAAGACATATGTTACATGCTCAAAGGACTCTGAGGAGACACACTTGCCCACAGAGCTTTCAAAC
ACATACACCTTCCCCAATCCCGCGCACCCTCCAGGATCACAGCCAGCGAAGCTAGGTTTACTGTGCTCGC
CAGAGAGACTGCCTGAGGAGCTCTGCTAA

Translation (382 aa):
MRSEPTNAAGNTTLGVTSVLQSTSVPSSETCHVSYEESRVVLVVVYSAVCLLGLPANCLTAWLTLLQVLQ
RNVLAVYLFCLSLCELLYISTVPLWIIYIQNQHKWNLGPQACKVTAYIFFCNIYISILLLCCISCDRYMA
VVYALESRGHRHQRTAVTISACVILLVGLVNYPVFDMKVEKSFCFEPLRMNSKIAGYHYLRFTFGFAIPL
GILAFTNHQIFRSIKLSDSLSAAQKNKVKRSAIAVVTIFLVCFAPYHVVLLVKAASFSFYQGDMDAVCAF
ESRLYTVSMVFLCLSTVNSVADPIIYVLGTDHSRQEVSRIHTGWKKWSTKTYVTCSKDSEETHLPTELSN
TYTFPNPAHPPGSQPAKLGLLCSPERLPEELC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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