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Report for CCDS2637.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2637.1 Public Homo sapiens 3 UBE2E2 24 110 108 CCDS HistoryNCBI Gene:7325Re-query CCDS DB by CCDS ID:2637.1Re-query CCDS DB by GeneID:7325See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2637.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000396703.6 ENSP00000379931.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000396703.6Link to Ensembl Protein Viewer:ENSP00000379931.1Re-query CCDS DB by Nucleotide ID:ENST00000396703Re-query CCDS DB by Protein ID:ENSP00000379931
Original member Current member EBI ENST00000425792.5 ENSP00000401053.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000425792.5Link to Ensembl Protein Viewer:ENSP00000401053.1Re-query CCDS DB by Nucleotide ID:ENST00000425792Re-query CCDS DB by Protein ID:ENSP00000401053
Original member Current member NCBI NM_001370225.1 NP_001357154.1 Accepted alive Link to Nucleotide Sequence:NM_001370225.1Link to Protein Sequence:NP_001357154.1Re-query CCDS DB by Nucleotide ID:NM_001370225Re-query CCDS DB by Protein ID:NP_001357154Link to BLAST:NP_001357154.1
Original member Current member NCBI NM_152653.4 NP_689866.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152653.4Link to Protein Sequence:NP_689866.1Re-query CCDS DB by Nucleotide ID:NM_152653Re-query CCDS DB by Protein ID:NP_689866Link to BLAST:NP_689866.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001357154.1 201 Q96LR5 201 100% 0 0
NP_689866.1 201 Q96LR5 201 100% 0 0

Chromosomal Locations for CCDS 2637.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 23208700 23208875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 23217262 23217312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 23499608 23499740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 23532554 23532701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 23589734 23589831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (606 nt):
ATGTCCACTGAGGCACAAAGAGTTGATGACAGTCCAAGCACTAGTGGAGGAAGTTCCGATGGAGATCAAC
GTGAAAGTGTTCAGCAAGAACCAGAAAGAGAACAAGTTCAGCCCAAGAAAAAGGAGGGAAAAATATCCAG
CAAAACCGCTGCTAAATTGTCAACTAGTGCTAAAAGAATTCAGAAGGAACTTGCAGAAATCACATTGGAC
CCTCCTCCCAACTGTAGTGCTGGACCCAAAGGAGACAACATTTATGAATGGAGGTCAACTATATTGGGAC
CCCCAGGATCTGTCTATGAAGGAGGGGTGTTCTTTCTTGACATTACCTTTTCACCAGACTATCCGTTTAA
ACCCCCTAAGGTTACCTTCCGAACAAGAATCTATCACTGTAATATTAACAGCCAAGGTGTGATCTGTCTG
GACATCTTAAAGGACAACTGGAGTCCGGCTTTAACTATTTCTAAAGTTCTCCTCTCCATCTGCTCACTTC
TTACAGATTGCAACCCTGCTGACCCTCTGGTGGGCAGCATCGCCACACAGTACATGACCAACAGAGCAGA
GCATGACCGGATGGCCAGACAGTGGACCAAGCGGTACGCCACATAG

Translation (201 aa):
MSTEAQRVDDSPSTSGGSSDGDQRESVQQEPEREQVQPKKKEGKISSKTAAKLSTSAKRIQKELAEITLD
PPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICL
DILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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