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Report for CCDS26710.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26710.1 Public Mus musculus 13 Enc1 23 108 98 CCDS HistoryNCBI Gene:13803Re-query CCDS DB by CCDS ID:26710.1Re-query CCDS DB by GeneID:13803See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26710.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000041623.8 ENSMUSP00000038783.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000041623.8Link to Ensembl Protein Viewer:ENSMUSP00000038783.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000041623Re-query CCDS DB by Protein ID:ENSMUSP00000038783
Original member Current member NCBI NM_007930.4 NP_031956.3 Accepted alive Link to Nucleotide Sequence:NM_007930.4Link to Protein Sequence:NP_031956.3Re-query CCDS DB by Nucleotide ID:NM_007930Re-query CCDS DB by Protein ID:NP_031956Link to BLAST:NP_031956.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031956.3 589 O35709 589 100% 0 0

Chromosomal Locations for CCDS 26710.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 97244984 97246753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1770 nt):
ATGTCAGTCAGTGTGCATGAGAACCGCAAGTCCAGGGCCAGCAGTGGCTCCATCAACATCTACCTGTTTC
ATAAGTCCTCCTACGCGGACAGCGTTCTCACTCACCTGAACCTTCTGCGTCAGCAGCGGCTCTTCACAGA
TGTCCTTCTCCATGCGGGAAACAGGACCTTCCCTTGCCACCGGGCAGTGCTGGCTGCGTGCAGCCGCTAC
TTCGAAGCCATGTTCAGTGGTGGCCTGAAAGAGAGCCAGGACAGTGAGGTGAACTTCGACAATTCCATCC
ACCCAGAAGTCTTAGAGCTGCTTCTAGACTACGCATACTCCTCCCGGGTCATTATCAATGAAGAAAATGC
TGAGTCGCTCCTGGAGGCTGGTGACATGCTGGAGTTCCAGGACATCAGAGATGCGTGTGCAGAATTTCTA
GAGAAGAACCTGCATCCCACCAACTGCCTGGGTATGCTGCTGTTGTCTGATGCCCACCAGTGCACCAAGC
TGTACGAACTCTCCTGGAGAATGTGTCTCAGCAACTTCCAAACCATTCGGAAGAACGAAGATTTCCTCCA
GTTGCCCCAGGACATGGTTGTGCAGCTGCTGTCCAGTGAAGAACTGGAGACGGAAGACGAAAGGCTGGTG
TATGAGTCTGCGATGAACTGGATCAGCTATGACCTGAAGAAGCGCTACTGTTACCTCCCGGAACTGTTGC
AGACAGTGAGGCTGGCCCTCCTTCCTGCCATCTATCTCATGGAGAACGTGGCGATGGAAGAACTCATCAC
CAAGCAGAGAAAGAGTAAGGAGATCGTGGAAGAGGCCATCAGGTGCAAACTAAAAATCTTACAGAATGAC
GGCGTGGTCACCAGTCTCTGTGCTCGTCCTCGGAAAACTGGCCATGCCCTGTTCCTCCTGGGAGGGCAGA
CTTTCATGTGTGACAAACTGTACTTGGTAGACCAGAAGGCTAAAGAAATCATTCCCAAGGCTGACATTCC
CAGCCCGAGGAAAGAGTTCAGCGCATGTGCAATTGGCTGCAAAGTATATATTACTGGGGGGCGGGGATCA
GAGAACGGAGTCTCAAAAGATGTCTGGGTTTACGATACCCTGCATGAGGAGTGGTCCAAGGCTGCCCCCA
TGCTGGTGGCCAGGTTTGGCCATGGATCTGCTGAACTGAAGCACTGCCTCTATGTAGTCGGTGGGCACAC
AGCTGCAACTGGCTGCCTCCCAGCCTCCCCCTCGGTCTCCCTAAAGCAAGTAGAACAGTATGACCCCACA
ACCAACAAATGGACCATGGTAGCCCCACTCCGCGAAGGTGTCAGCAATGCTGCTGTAGTGAGTGCCAAAC
TTAAGCTGTTTGCTTTCGGGGGTACCAGTGTGAGCCACGACAAGCTGCCCAAGGTTCAGTGTTACGATCA
ATGCGAGAACAGATGGTCAGTGCCGGCCACCTGTCCCCAGCCCTGGCGTTACACAGCCGCAGCTGTGCTG
GGAAACCAGATTTTTATCATGGGTGGAGATACAGAGTTCTCTGCCTGCTCCGCTTACAAATTCAATAGTG
AGACTTACCAGTGGACCAAGGTGGGAGATGTGACAGCCAAGCGCATGAGCTGCCACGCCGTGGCGTCCGG
GAACAAGCTTTACGTAGTTGGAGGGTACTTCGGCATTCAGCGCTGCAAGACTTTGGACTGTTACGACCCA
ACTTTAGATGTGTGGAACAGCATAACCACTGTTCCCTACTCTCTGATCCCTACTGCATTCGTCAGCACCT
GGAAACACCTGCCTTCCTAA

Translation (589 aa):
MSVSVHENRKSRASSGSINIYLFHKSSYADSVLTHLNLLRQQRLFTDVLLHAGNRTFPCHRAVLAACSRY
FEAMFSGGLKESQDSEVNFDNSIHPEVLELLLDYAYSSRVIINEENAESLLEAGDMLEFQDIRDACAEFL
EKNLHPTNCLGMLLLSDAHQCTKLYELSWRMCLSNFQTIRKNEDFLQLPQDMVVQLLSSEELETEDERLV
YESAMNWISYDLKKRYCYLPELLQTVRLALLPAIYLMENVAMEELITKQRKSKEIVEEAIRCKLKILQND
GVVTSLCARPRKTGHALFLLGGQTFMCDKLYLVDQKAKEIIPKADIPSPRKEFSACAIGCKVYITGGRGS
ENGVSKDVWVYDTLHEEWSKAAPMLVARFGHGSAELKHCLYVVGGHTAATGCLPASPSVSLKQVEQYDPT
TNKWTMVAPLREGVSNAAVVSAKLKLFAFGGTSVSHDKLPKVQCYDQCENRWSVPATCPQPWRYTAAAVL
GNQIFIMGGDTEFSACSAYKFNSETYQWTKVGDVTAKRMSCHAVASGNKLYVVGGYFGIQRCKTLDCYDP
TLDVWNSITTVPYSLIPTAFVSTWKHLPS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
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