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Report for CCDS26961.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26961.1 Public Mus musculus 14 Mbl1 23 108 98 CCDS HistoryNCBI Gene:17194Re-query CCDS DB by CCDS ID:26961.1Re-query CCDS DB by GeneID:17194See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 26961.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000225792.1 ENSMUSP00000153147.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000225792.1Link to Ensembl Protein Viewer:ENSMUSP00000153147.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000225792Re-query CCDS DB by Protein ID:ENSMUSP00000153147
Original member Current member NCBI NM_010775.2 NP_034905.1 Accepted alive Link to Nucleotide Sequence:NM_010775.2Link to Protein Sequence:NP_034905.1Re-query CCDS DB by Nucleotide ID:NM_010775Re-query CCDS DB by Protein ID:NP_034905Link to BLAST:NP_034905.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034905.1 239 P39039-1 239 100% 0 0

Chromosomal Locations for CCDS 26961.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 41153591 41153744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 41154501 41154617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 41157145 41157219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 41158503 41158876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (720 nt):
ATGCTTCTGCTTCCATTACTCCCTGTCCTTCTGTGTGTGGTGAGTGTGTCCTCATCAGGGTCACAAACCT
GTGAGGACACCCTGAAGACTTGCTCTGTGATAGCCTGTGGCAGAGATGGGAGAGATGGACCCAAAGGGGA
GAAGGGAGAACCAGGTCAAGGGCTCAGGGGCTTGCAGGGCCCTCCAGGGAAATTGGGGCCTCCAGGAAGT
GTTGGAAGCCCTGGAAGTCCAGGACCAAAAGGCCAAAAGGGGGACCATGGAGACAATAGAGCCATTGAGG
AGAAGCTGGCAAATATGGAGGCAGAGATAAGGATCCTGAAATCAAAACTGCAGCTAACCAACAAGTTGCA
TGCCTTCTCAATGGGCAAAAAGTCTGGGAAGAAGTTGTTTGTGACCAACCATGAGAAGATGCCCTTTTCC
AAAGTGAAGTCTCTGTGCACAGAGCTCCAAGGCACTGTGGCTATCCCCAGGAATGCTGAAGAGAACAAGG
CCATTCAAGAAGTGGCCACAGGCATTGCCTTCCTAGGCATCACGGACGAGGCGACTGAAGGGCAGTTCAT
GTACGTGACAGGGGGGAGGCTCACCTACAGCAACTGGAAAAAGGATGAGCCAAATAACCATGGCTCTGGG
GAAGACTGTGTCATTATATTAGATAATGGTTTGTGGAATGACATTTCCTGTCAAGCTTCCTTCAAGGCTG
TCTGCGAGTTCCCAGCCTGA

Translation (239 aa):
MLLLPLLPVLLCVVSVSSSGSQTCEDTLKTCSVIACGRDGRDGPKGEKGEPGQGLRGLQGPPGKLGPPGS
VGSPGSPGPKGQKGDHGDNRAIEEKLANMEAEIRILKSKLQLTNKLHAFSMGKKSGKKLFVTNHEKMPFS
KVKSLCTELQGTVAIPRNAEENKAIQEVATGIAFLGITDEATEGQFMYVTGGRLTYSNWKKDEPNNHGSG
EDCVIILDNGLWNDISCQASFKAVCEFPA


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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