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Report for CCDS27124.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27124.1 Public Mus musculus 14 Gmpr2 23 108 98 CCDS HistoryNCBI Gene:105446Re-query CCDS DB by CCDS ID:27124.1Re-query CCDS DB by GeneID:105446See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27124.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000002397.6 ENSMUSP00000002397.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000002397.6Link to Ensembl Protein Viewer:ENSMUSP00000002397.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000002397Re-query CCDS DB by Protein ID:ENSMUSP00000002397
Original member Current member NCBI NM_177992.2 NP_818773.1 Accepted alive Link to Nucleotide Sequence:NM_177992.2Link to Protein Sequence:NP_818773.1Re-query CCDS DB by Nucleotide ID:NM_177992Re-query CCDS DB by Protein ID:NP_818773Link to BLAST:NP_818773.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_818773.1 348 Q99L27 348 100% 0 0

Chromosomal Locations for CCDS 27124.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 55672715 55672801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55672950 55673069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55675327 55675410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55675559 55675732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55676755 55676836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55676928 55677034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55677206 55677248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55677871 55678030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55678224 55678413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1047 nt):
ATGCCTCATATTGATAATGATGTGAAACTTGACTTCAAGGATGTCCTGTTGAGGCCCAAACGCAGCACTC
TTAAGTCTCGAAGTGAGGTAGAGCTCACAAGATCATTTTCGTTCCGGAACTCAAAGCAGATGTACAGTGG
CATCCCTGTCATTGCTGCCAATATGGATACCGTGGGCACTTTTGAAATGGCTAGGGTTCTCTGTAAGTTC
TCCCTGTTCACTGCCATCCATAAGCACTACAGCATCCATCAGTGGCAAGAGTTTGCTAGCCAGAATCCTG
ACTGTCTTGAGTGTCTAGCTGCCAGCTCAGGCTCAGGCTCTGCTGACTTTGAGCAGCTGGAACAGATCCT
GGAAGCTATTCCCCAAGTCAAATATATATGCCTGGATGTGGCTAACGGCTACTCTGAACATTTTGTTGAA
TTTGTAAAGGATGTACGGAAGCGATTCCCCCAACACACCATCATGGCAGGAAATGTGGTAACAGGAGAGA
TGGTAGAAGAGTTAATCCTTTCTGGGGCTGACATCATCAAAGTGGGAATTGGTCCTGGCTCTGTCTGTAC
AACTCGGAAGAAAACTGGAGTGGGGTATCCACAGCTCAGTGCAGTGATGGAGTGTGCAGATGCTGCTCAT
GGCCTCAAAGGCCATATCATCTCAGATGGAGGCTGCAGCTGTCCTGGGGATGTGGCAAAGGCTTTTGGGG
CAGGGGCTGACTTTGTGATGTTGGGTGGCATGCTGGCCGGGCACAGTGAATCAGGTGGCGAACTCATTGA
GAGAGATGGCAAGAAATATAAGCTCTTCTACGGAATGAGTTCTGAAATGGCCATGAAGAAGTACTCAGGA
GGTGTGGCTGAGTACAGGGCCTCAGAGGGAAAGATAGTAGAAGTCCCCTTTAAAGGCGATGTGGAACATA
CTATTCGTGACATCCTAGGAGGCATCCGGTCTACATGCACGTATGTAGGGGCTGCTAAACTGAAGGAACT
AAGCCGGAGAACTACTTTTATCCGAGTCACCCAGCAAGTGAATCCAATCTTCAGCAATTCCCAGTAG

Translation (348 aa):
MPHIDNDVKLDFKDVLLRPKRSTLKSRSEVELTRSFSFRNSKQMYSGIPVIAANMDTVGTFEMARVLCKF
SLFTAIHKHYSIHQWQEFASQNPDCLECLAASSGSGSADFEQLEQILEAIPQVKYICLDVANGYSEHFVE
FVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAH
GLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERDGKKYKLFYGMSSEMAMKKYSG
GVAEYRASEGKIVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFSNSQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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