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Report for CCDS27545.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27545.1 Public Mus musculus 15 Gpihbp1 23 108 98 CCDS HistoryNCBI Gene:68453Re-query CCDS DB by CCDS ID:27545.1Re-query CCDS DB by GeneID:68453See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27545.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000023243.10 ENSMUSP00000023243.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000023243.10Link to Ensembl Protein Viewer:ENSMUSP00000023243.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000023243Re-query CCDS DB by Protein ID:ENSMUSP00000023243
Original member Current member NCBI NM_026730.2 NP_081006.1 Accepted alive Link to Nucleotide Sequence:NM_026730.2Link to Protein Sequence:NP_081006.1Re-query CCDS DB by Nucleotide ID:NM_026730Re-query CCDS DB by Protein ID:NP_081006Link to BLAST:NP_081006.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081006.1 228 Q9D1N2 228 100% 0 0

Chromosomal Locations for CCDS 27545.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 75596679 75596730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75597031 75597153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75597513 75597629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75597730 75598124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (687 nt):
ATGAAGGCTCTCAGGGCTGTCCTCCTGATCTTGCTACTAAGTGGACAGCCAGGGAGTGGCTGGGCACAAG
AAGATGGTGATGCGGACCCGGAGCCAGAGAACTACAACTACGATGATGACGATGATGAAGAGGAAGAGGA
GGAGACCAACATGATCCCTGGAAGCAGGGACAGAGCACCTCTACAATGCTACTTCTGTCAAGTGCTTCAC
AGCGGGGAGAGCTGCAATCAGACACAGAGCTGCTCCAGCAGCAAACCCTTCTGCATCACGCTCGTCTCCC
ACAGCGGAACCGACAAAGGTTACCTGACTACCTACTCCATGTGGTGTACTGATACCTGCCAGCCCATCAT
CAAGACAGTGGGAGGCACCCAGATGACTCAGACCTGTTGCCAGTCCACACTGTGCAATATTCCACCCTGG
CAGAACCCCCAAGTCCAGAACCCTCTGGGTGGCCGGGCAGACAGCCCCCTGGAAAGTGGGACTAGACATC
CTCAGGGTGGCAAGTTTAGCCACCCCCAGGTTGTCAAGGCTGCTCATCCTCAGAGCGATGGGGCTAACTT
GCCTAAGAGTGGCAAGGCTAACCAGCCCCAGGGAAGTGGGGCAGGATACCCTTCAGGCTGGACCAAATTT
GGTAATATAGCCCTCCTGCTCAGCTTCTTCACTTGTCTGTGGGCGTCAGGGGCCTGA

Translation (228 aa):
MKALRAVLLILLLSGQPGSGWAQEDGDADPEPENYNYDDDDDEEEEEETNMIPGSRDRAPLQCYFCQVLH
SGESCNQTQSCSSSKPFCITLVSHSGTDKGYLTTYSMWCTDTCQPIIKTVGGTQMTQTCCQSTLCNIPPW
QNPQVQNPLGGRADSPLESGTRHPQGGKFSHPQVVKAAHPQSDGANLPKSGKANQPQGSGAGYPSGWTKF
GNIALLLSFFTCLWASGA


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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