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Report for CCDS2766.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2766.2 Public Homo sapiens 3 CCDC51 24 110 108 CCDS HistoryNCBI Gene:79714Re-query CCDS DB by CCDS ID:2766.2Re-query CCDS DB by GeneID:79714See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 2766.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000395694.7 ENSP00000379047.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000395694.7Link to Ensembl Protein Viewer:ENSP00000379047.2Re-query CCDS DB by Nucleotide ID:ENST00000395694Re-query CCDS DB by Protein ID:ENSP00000379047
Original member Current member NCBI NM_001256964.2 NP_001243893.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001256964.2Link to Protein Sequence:NP_001243893.1Re-query CCDS DB by Nucleotide ID:NM_001256964Re-query CCDS DB by Protein ID:NP_001243893Link to BLAST:NP_001243893.1
Original member Current member NCBI NM_024661.5 NP_078937.3 Accepted alive Link to Nucleotide Sequence:NM_024661.5Link to Protein Sequence:NP_078937.3Re-query CCDS DB by Nucleotide ID:NM_024661Re-query CCDS DB by Protein ID:NP_078937Link to BLAST:NP_078937.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001243893.1 411 Q96ER9-1 411 100% 0 0
NP_078937.3 411 Q96ER9-1 411 100% 0 0

Chromosomal Locations for CCDS 2766.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 48432408 48433166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 48433707 48433871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 48434817 48435128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1236 nt):
ATGATGGGGCGCAGCCCTGGGTTTGCCATGCAGCACATCGTGGGTGTGCCCCACGTACTGGTTCGGAGGG
GCCTCCTTGGAAGGGACCTCTTCATGACCAGGACTCTCTGCAGCCCAGGCCCAAGCCAGCCCGGAGAGAA
AAGACCTGAGGAGGTGGCCCTGGGGCTGCACCACCGCCTCCCAGCACTGGGAAGAGCCCTGGGGCACAGC
ATTCAGCAACGAGCGACCTCCACAGCCAAGACTTGGTGGGACAGATATGAAGAGTTTGTTGGACTCAACG
AGGTTCGAGAGGCCCAGGGAAAGGTGACAGAGGCTGAGAAAGTGTTCATGGTGGCTCGAGGGCTTGTCCG
AGAGGCTCGGGAGGACTTGGAAGTTCACCAGGCCAAGCTGAAGGAGGTGAGGGACCGCTTGGACCGTGTC
TCCAGGGAGGACAGTCAGTACTTGGAACTGGCTACTCTCGAGCACAGGATGCTGCAGGAGGAGAAGAGGC
TTCGCACAGCCTATCTGCGTGCAGAAGACTCTGAGCGAGAGAAGTTCTCCCTCTTCTCTGCAGCTGTGCG
GGAAAGTCATGAGAAGGAGCGCACAAGGGCTGAGAGGACCAAGAACTGGTCCCTCATTGGCTCAGTCCTG
GGGGCCCTGATTGGTGTGGCTGGCTCCACCTATGTGAACCGTGTGCGACTACAGGAGCTGAAGGCTTTAC
TCCTGGAGGCGCAGAAGGGGCCTGTGAGTCTCCAAGAGGCCATTCGAGAACAGGCGTCTAGCTACTCCCG
CCAGCAGAGGGACCTCCACAATCTCATGGTGGACCTGAGGGGCCTGGTACATGCTGCTGGGCCAGGGCAG
GACTCTGGGTCACAGGCAGGTAGTCCCCCGACCAGAGACAGAGATGTAGATGTCCTTTCAGCTGCCTTGA
AAGAGCAGCTTAGTCATTCCAGGCAAGTCCATTCATGTCTAGAAGGCTTACGAGAGCAGCTTGATGGCCT
AGAAAAGACTTGTAGCCAAATGGCTGGGGTGGTTCAGCTTGTAAAGTCTGCAGCACACCCAGGCCTGGTG
GAACCAGCAGACGGGGCTATGCCCAGCTTCTTGCTGGAGCAGGGGAGCATGATCTTGGCACTGTCAGACA
CGGAGCAGAGACTAGAAGCCCAAGTCAACAGGAACACCATCTATAGCACCCTGGTCACCTGTGTGACATT
TGTGGCCACACTGCCTGTGCTCTACATGCTATTCAAAGCCAGCTAA

Translation (411 aa):
MMGRSPGFAMQHIVGVPHVLVRRGLLGRDLFMTRTLCSPGPSQPGEKRPEEVALGLHHRLPALGRALGHS
IQQRATSTAKTWWDRYEEFVGLNEVREAQGKVTEAEKVFMVARGLVREAREDLEVHQAKLKEVRDRLDRV
SREDSQYLELATLEHRMLQEEKRLRTAYLRAEDSEREKFSLFSAAVRESHEKERTRAERTKNWSLIGSVL
GALIGVAGSTYVNRVRLQELKALLLEAQKGPVSLQEAIREQASSYSRQQRDLHNLMVDLRGLVHAAGPGQ
DSGSQAGSPPTRDRDVDVLSAALKEQLSHSRQVHSCLEGLREQLDGLEKTCSQMAGVVQLVKSAAHPGLV
EPADGAMPSFLLEQGSMILALSDTEQRLEAQVNRNTIYSTLVTCVTFVATLPVLYMLFKAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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