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Report for CCDS2818.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2818.1 Public Homo sapiens 3 HYAL2 24 110 108 CCDS HistoryNCBI Gene:8692Re-query CCDS DB by CCDS ID:2818.1Re-query CCDS DB by GeneID:8692See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2818.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357750.9 ENSP00000350387.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000357750.9Link to Ensembl Protein Viewer:ENSP00000350387.4Re-query CCDS DB by Nucleotide ID:ENST00000357750Re-query CCDS DB by Protein ID:ENSP00000350387
Original member Current member EBI ENST00000395139.7 ENSP00000378571.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395139.7Link to Ensembl Protein Viewer:ENSP00000378571.3Re-query CCDS DB by Nucleotide ID:ENST00000395139Re-query CCDS DB by Protein ID:ENSP00000378571
Original member Current member EBI ENST00000447092.5 ENSP00000401853.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000447092.5Link to Ensembl Protein Viewer:ENSP00000401853.1Re-query CCDS DB by Nucleotide ID:ENST00000447092Re-query CCDS DB by Protein ID:ENSP00000401853
Original member Current member EBI ENST00000442581.1 ENSP00000406657.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000442581.1Link to Ensembl Protein Viewer:ENSP00000406657.1Re-query CCDS DB by Nucleotide ID:ENST00000442581Re-query CCDS DB by Protein ID:ENSP00000406657
Original member Current member NCBI NM_003773.5 NP_003764.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003773.5Link to Protein Sequence:NP_003764.3Re-query CCDS DB by Nucleotide ID:NM_003773Re-query CCDS DB by Protein ID:NP_003764Link to BLAST:NP_003764.3
Original member Current member NCBI NM_033158.5 NP_149348.2 Accepted alive Link to Nucleotide Sequence:NM_033158.5Link to Protein Sequence:NP_149348.2Re-query CCDS DB by Nucleotide ID:NM_033158Re-query CCDS DB by Protein ID:NP_149348Link to BLAST:NP_149348.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003764.3 473 Q12891 473 100% 0 0
NP_149348.2 473 Q12891 473 100% 0 0

Chromosomal Locations for CCDS 2818.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 50318129 50318539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 50318956 50319045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 50319569 50320489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1422 nt):
ATGCGGGCAGGCCCAGGCCCCACCGTTACATTGGCCCTGGTGCTGGCGGTGTCATGGGCCATGGAGCTCA
AGCCCACAGCACCACCCATCTTCACTGGCCGGCCCTTTGTGGTAGCGTGGGACGTGCCCACACAGGACTG
TGGCCCACGCCTCAAGGTGCCACTGGACCTGAATGCCTTTGATGTGCAGGCCTCACCTAATGAGGGTTTT
GTGAACCAGAATATTACCATCTTCTACCGCGACCGTCTAGGCCTGTATCCACGCTTCGATTCTGCCGGAA
GGTCTGTGCATGGTGGTGTGCCACAGAATGTCAGCCTTTGGGCACACCGGAAGATGCTGCAGAAACGTGT
GGAGCACTACATTCGGACACAGGAGTCTGCGGGGCTGGCGGTCATCGACTGGGAGGACTGGCGACCTGTG
TGGGTGCGCAACTGGCAGGACAAAGATGTGTATCGCCGGTTATCACGCCAGCTAGTGGCCAGTCGTCACC
CTGACTGGCCTCCAGACCGCATAGTCAAACAGGCACAATATGAGTTTGAGTTCGCAGCACAGCAGTTCAT
GCTGGAGACACTGCGTTATGTCAAGGCAGTGCGGCCCCGGCACCTCTGGGGCTTCTACCTCTTTCCTGAC
TGCTACAATCATGATTATGTGCAGAACTGGGAGAGCTACACAGGCCGCTGCCCTGATGTTGAGGTGGCCC
GCAATGACCAGCTGGCCTGGCTGTGGGCTGAGAGCACGGCCCTCTTCCCGTCTGTCTACCTGGACGAGAC
ACTTGCTTCCTCCCGCCATGGCCGCAACTTTGTGAGCTTCCGTGTTCAGGAGGCCCTTCGTGTGGCTCGC
ACCCACCATGCCAACCATGCACTCCCAGTCTACGTCTTCACACGACCCACCTACAGCCGCAGGCTCACGG
GGCTTAGTGAGATGGACCTCATCTCTACCATTGGCGAGAGTGCGGCCCTGGGCGCAGCTGGTGTCATCCT
CTGGGGTGACGCGGGGTACACCACAAGCACGGAGACCTGCCAGTACCTCAAAGATTACCTGACACGGCTG
CTGGTCCCCTACGTGGTCAATGTGTCCTGGGCCACCCAATATTGCAGCCGGGCCCAGTGCCATGGCCATG
GGCGCTGTGTGCGCCGCAACCCCAGTGCCAGTACCTTCCTGCATCTCAGCACCAACAGTTTCCGCCTAGT
GCCTGGCCATGCACCTGGTGAACCCCAGCTGCGACCTGTGGGGGAGCTCAGTTGGGCCGACATTGACCAC
CTGCAGACACACTTCCGCTGCCAGTGCTACTTGGGCTGGAGTGGTGAGCAATGCCAGTGGGACCATAGGC
AGGCAGCTGGAGGTGCCAGCGAGGCCTGGGCTGGGTCCCACCTCACCAGTCTGCTGGCTCTGGCAGCCCT
GGCCTTTACCTGGACCTTGTAG

Translation (473 aa):
MRAGPGPTVTLALVLAVSWAMELKPTAPPIFTGRPFVVAWDVPTQDCGPRLKVPLDLNAFDVQASPNEGF
VNQNITIFYRDRLGLYPRFDSAGRSVHGGVPQNVSLWAHRKMLQKRVEHYIRTQESAGLAVIDWEDWRPV
WVRNWQDKDVYRRLSRQLVASRHPDWPPDRIVKQAQYEFEFAAQQFMLETLRYVKAVRPRHLWGFYLFPD
CYNHDYVQNWESYTGRCPDVEVARNDQLAWLWAESTALFPSVYLDETLASSRHGRNFVSFRVQEALRVAR
THHANHALPVYVFTRPTYSRRLTGLSEMDLISTIGESAALGAAGVILWGDAGYTTSTETCQYLKDYLTRL
LVPYVVNVSWATQYCSRAQCHGHGRCVRRNPSASTFLHLSTNSFRLVPGHAPGEPQLRPVGELSWADIDH
LQTHFRCQCYLGWSGEQCQWDHRQAAGGASEAWAGSHLTSLLALAALAFTWTL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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