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Report for CCDS29161.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29161.1 Public Mus musculus 18 Ndufa2 23 108 98 CCDS HistoryNCBI Gene:17991Re-query CCDS DB by CCDS ID:29161.1Re-query CCDS DB by GeneID:17991See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29161.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000014438.4 ENSMUSP00000014438.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000014438.4Link to Ensembl Protein Viewer:ENSMUSP00000014438.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000014438Re-query CCDS DB by Protein ID:ENSMUSP00000014438
Original member Current member NCBI NM_010885.5 NP_035015.2 Accepted alive Link to Nucleotide Sequence:NM_010885.5Link to Protein Sequence:NP_035015.2Re-query CCDS DB by Nucleotide ID:NM_010885Re-query CCDS DB by Protein ID:NP_035015Link to BLAST:NP_035015.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_035015.2 99 Q9CQ75 99 100% 0 0

Chromosomal Locations for CCDS 29161.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 18 (NC_000084.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 36742567 36742658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36744181 36744287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36744420 36744520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (300 nt):
ATGGCGGCTGCCGCTGCTAGCCGAGCGGTCGGCGCAAAGCTGGGGTTGCGTGAGATTCGCGTTCACTTAT
GCCAGCGTTCCCCAGGCAGCCAGGGTGTGAGGGATTTCATCGTGCAACGGTACGTGGAGCTGAAGAAGGC
GCACCCCAACCTGCCCATTCTGATCCGCGAATGCTCGGAGGTGCAGCCCAAGCTTTGGGCCCGCTATGCT
TTTGGCCAAGAGAAGACGGTGTCTCTGAACAATCTGAGTGCTGATGAGGTAACCAGAGCCATGCAGAATG
TGCTAAGCGGCAAAGCCTGA

Translation (99 aa):
MAAAAASRAVGAKLGLREIRVHLCQRSPGSQGVRDFIVQRYVELKKAHPNLPILIRECSEVQPKLWARYA
FGQEKTVSLNNLSADEVTRAMQNVLSGKA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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