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Report for CCDS29449.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29449.1 Public Mus musculus 19 Tmem151a 23 108 98 CCDS HistoryNCBI Gene:381199Re-query CCDS DB by CCDS ID:29449.1Re-query CCDS DB by GeneID:381199See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29449.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000077066.7 ENSMUSP00000076321.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000077066.7Link to Ensembl Protein Viewer:ENSMUSP00000076321.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000077066Re-query CCDS DB by Protein ID:ENSMUSP00000076321
Original member NCBI NM_001001885.1 NP_001001885.1 Updated not alive Link to Nucleotide Sequence:NM_001001885.1Link to Protein Sequence:NP_001001885.1Re-query CCDS DB by Nucleotide ID:NM_001001885Re-query CCDS DB by Protein ID:NP_001001885
Current member NCBI NM_001001885.2 NP_001001885.1 Accepted alive Link to Nucleotide Sequence:NM_001001885.2Link to Protein Sequence:NP_001001885.1Re-query CCDS DB by Nucleotide ID:NM_001001885Re-query CCDS DB by Protein ID:NP_001001885Link to BLAST:NP_001001885.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001001885.1 468 Q6GQT5 468 100% 0 0

Chromosomal Locations for CCDS 29449.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 5081770 5083101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5085298 5085372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1407 nt):
ATGCCGGAGGGCGAAGGTGGAGACTGCGGGGAGGTGCCCGCGCTCGTTCCGGACGGCGAGCCGCTGCGAG
AGGAGCAGCGGCCCCTGAAGCAGTCCCTGGGAGGCTCTCTGTGTCGAGAGTCTCACTGGAAGTGCCTGCT
CCTTACACTGCTCATCCATGCCTGTGGGGCTGTGGTGGCCTGGTGTCGCTTAGCCACTGTGCCCCGCCTG
GTCCTGGGGCCTGAGGCAGCCTTGGCTCGTGGGGCTGGCGGTCCACCGCCCACCTACCCAGCCAGTCCCT
GCTCGGATGGCTACCTGTACATCCCATTGGCCTTCGTCTCCCTCCTCTACCTCCTCTACCTGGCCGAGTG
CTGGCACTGTCATGTGCGGTCATGCCAGGCGCCTCGCACCGATGCCAACACAGTGCTTGCCCTGATCCAC
CGGCTGCAACAGGCTCCGCCCTGTGTCTGGTGGAAGGCCACCAGCTACCACTACGTGCGCCGCACACGCC
AGATCACCCGCTACCGCAATGGGGACGCCTATACCACCACACAGGTCTACCATGAGAGGGCGGACAGTCG
CACAGCTCGGGGTGAGTTTGACTACAGTGCACATGGTGTCCGTGACGTCTCTAAGGAGCTCGTGGGCCTG
GCAGACCACGCAGCCACGCGGCTGCGTTTCACCAAGTGCTTCAGCTTTGGGAGTGCTGAGGCCGAGGCCT
CGTACCTCACGCAGAGGGCCCGCTTCTTCAGTGCCAATGAGGGCCTGGACGACTACCTAGAGGCCCGGGA
GGGCATGCATCTGAAGGATGTGGACTTCCGTGAGTCCCTCATGGTCTTTGCAGACCCCCGCAGCCCACCC
TGGTATGCCCGAGCCTGGGTCTTCTGGCTGGTGTCTGCAGCCACGCTGTCCTGGCCACTGCGAGTGGTGG
CAGCCTATGGGACAGCCCATGTGCACTACCAAGTGGAGAAGCTTTTCGGTGCCAGCTCACCGCCCCCAGG
GGCTGTGCCCAGCGGACCACCACTCTCTCGCGTGGCCACCGTGGACTTCACAGAGCTTGAGTGGCACATC
TGCTCCAACCGGCAGCTGGTGCCCAGCTACTCGGAGGCTGTGGTTATGGGTGCCAGCTCTGGGGCCTACC
TGCGAGGCTGCCAACGCTGCCGCCGCTCGGTCAGCAGCAACTCCCTGCCTCCTGCCCGCCCCAGCGGGCC
TCGCCTACCCTTCAGTCGCAGCCGCCTCTCGCTAGGTGCTGGGGGCCGAACCACCCCAGGGGTCTTCCGA
AGCTTAAGTGGAGGTCCCTTGGGACGCAGAGGGGAGGACACGGAGCCTCTGGAAAGCCCTCCGTGCTATG
AGGACGCCCTTTACTTCCCGGTGCTCATTGTCCACGGAGACAGCGGCTGCCGGGGAGATGGGCAGGGTGC
ACTCTGA

Translation (468 aa):
MPEGEGGDCGEVPALVPDGEPLREEQRPLKQSLGGSLCRESHWKCLLLTLLIHACGAVVAWCRLATVPRL
VLGPEAALARGAGGPPPTYPASPCSDGYLYIPLAFVSLLYLLYLAECWHCHVRSCQAPRTDANTVLALIH
RLQQAPPCVWWKATSYHYVRRTRQITRYRNGDAYTTTQVYHERADSRTARGEFDYSAHGVRDVSKELVGL
ADHAATRLRFTKCFSFGSAEAEASYLTQRARFFSANEGLDDYLEAREGMHLKDVDFRESLMVFADPRSPP
WYARAWVFWLVSAATLSWPLRVVAAYGTAHVHYQVEKLFGASSPPPGAVPSGPPLSRVATVDFTELEWHI
CSNRQLVPSYSEAVVMGASSGAYLRGCQRCRRSVSSNSLPPARPSGPRLPFSRSRLSLGAGGRTTPGVFR
SLSGGPLGRRGEDTEPLESPPCYEDALYFPVLIVHGDSGCRGDGQGAL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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