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Report for CCDS29477.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29477.1 Public Mus musculus 19 Kcnk7 23 108 98 CCDS HistoryNCBI Gene:16530Re-query CCDS DB by CCDS ID:29477.1Re-query CCDS DB by GeneID:16530See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29477.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000052448.3 ENSMUSP00000051278.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000052448.3Link to Ensembl Protein Viewer:ENSMUSP00000051278.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000052448Re-query CCDS DB by Protein ID:ENSMUSP00000051278
Original member NCBI NM_010609.3 NP_034739.2 Updated not alive Link to Nucleotide Sequence:NM_010609.3Link to Protein Sequence:NP_034739.2Re-query CCDS DB by Nucleotide ID:NM_010609Re-query CCDS DB by Protein ID:NP_034739
Current member NCBI NM_010609.4 NP_034739.2 Accepted alive Link to Nucleotide Sequence:NM_010609.4Link to Protein Sequence:NP_034739.2Re-query CCDS DB by Nucleotide ID:NM_010609Re-query CCDS DB by Protein ID:NP_034739Link to BLAST:NP_034739.2

Chromosomal Locations for CCDS 29477.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 5704476 5704794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5706067 5706465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5706703 5707016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1032 nt):
ATGGGGAGTCTGAAACCATGGGCCCGATACCTGCTCCTGCTTATGGCCCACCTGCTGGCCATGGGCCTTG
GGGCTGTGGTGCTTCAGGCCCTGGAGGGCCCTCCAGCTCGCCACCTCCAGGCCCAGGTCCAGGCTGAACT
GGCTAGCTTCCAGGCAGAGCACAGGGCCTGCTTGCCACCTGAGGCCCTGGAGGAGCTGCTAGGTGCGGTC
CTGAGAGCACAGGCCCATGGAGTTTCCAGCCTGGGCAACAGCTCAGAGACAAGCAACTGGGATCTGCCCT
CAGCTCTGCTGTTCACTGCCAGCATCCTCACCACCACCGGTTATGGCCACATGGCCCCACTCTCCTCAGG
TGGAAAGGCCTTCTGTGTGGTCTATGCAGCCCTTGGGCTGCCAGCCTCTCTAGCACTTGTGGCTGCCCTG
CGCCACTGCTTGCTGCCTGTGTTCAGTCGCCCAGGTGACTGGGTAGCCATTCGCTGGCAGCTGGCACCAG
CTCAGGCTGCTCTGCTACAGGCAGCAGGACTGGGCCTCCTGGTGGCCTGTGTCTTCATGCTGCTGCCAGC
ACTGGTGCTGTGGGGTGTACAGGGTGACTGCAGCCTGCTAGAAGCCATCTACTTCTGTTTCGGCTCACTC
AGCACGATCGGCCTAGGAGACTTGCTGCCTGCCCATGGACGTGGCCTGCACCCAGCCATTTACCACCTTG
GGCAGTTTGCACTTCTTGGTTACTTGCTCCTGGGGCTCCTGGCCATGTTGTTAGCAGTAGAGACCTTCTC
AGAGCTGCCTCAGGTCCGTGCCATGGTGAAATTCTTTGGGCCCAGTGGCTCTAGAACCGATGAAGATCAA
GATGGCATCCTAGGCCAAGATGAGCTGGCTCTGAGCACTGTGCTGCCTGACGCCCCAGTCTTGGGACCAA
CCACCCCAGCCTCAGTATCAGAACATCAGAACAGACCCCAGCCTGCTGACCCCAGTCAGGCGACAGGAAG
TCAGCTCGATCGTGTTGGGGGACCTGAGCGGGAGGCACCAAGGAGTGCTTGA

Translation (343 aa):
MGSLKPWARYLLLLMAHLLAMGLGAVVLQALEGPPARHLQAQVQAELASFQAEHRACLPPEALEELLGAV
LRAQAHGVSSLGNSSETSNWDLPSALLFTASILTTTGYGHMAPLSSGGKAFCVVYAALGLPASLALVAAL
RHCLLPVFSRPGDWVAIRWQLAPAQAALLQAAGLGLLVACVFMLLPALVLWGVQGDCSLLEAIYFCFGSL
STIGLGDLLPAHGRGLHPAIYHLGQFALLGYLLLGLLAMLLAVETFSELPQVRAMVKFFGPSGSRTDEDQ
DGILGQDELALSTVLPDAPVLGPTTPASVSEHQNRPQPADPSQATGSQLDRVGGPEREAPRSA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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