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Report for CCDS29663.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29663.1 Public Mus musculus 19 Or5b120 23 108 98 CCDS HistoryNCBI Gene:258691Re-query CCDS DB by CCDS ID:29663.1Re-query CCDS DB by GeneID:258691See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29663.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000217001.1 ENSMUSP00000149565.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000217001.1Link to Ensembl Protein Viewer:ENSMUSP00000149565.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000217001Re-query CCDS DB by Protein ID:ENSMUSP00000149565
Original member Current member EBI ENSMUST00000214274.1 ENSMUSP00000150803.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000214274.1Link to Ensembl Protein Viewer:ENSMUSP00000150803.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000214274Re-query CCDS DB by Protein ID:ENSMUSP00000150803
Original member Current member NCBI NM_146696.2 NP_666907.2 Accepted alive Link to Nucleotide Sequence:NM_146696.2Link to Protein Sequence:NP_666907.2Re-query CCDS DB by Nucleotide ID:NM_146696Re-query CCDS DB by Protein ID:NP_666907Link to BLAST:NP_666907.2

Chromosomal Locations for CCDS 29663.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 13502345 13503292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (948 nt):
ATGATGCAGAATATTTCAGAACTATCAGAATTTATTCTTGTTGGGTTAACAGATGCACCATTCCTGCAAA
CTCCTTTATTTATCATCTTTACTCTCATTTACTTGACAACATTGTTTGGGAATCTTGGGATGATAATGCT
GATTCTGCTGGACTCCAGACTCCACACTCCCATGTACTTTTTCCTCAGTAACCTCTCTCTGGTGGACTGT
GTTTATGCCTCAGCTGTCACCCCCAAGGTGATGGAAGGTTTTCTCACAGGAAATAAGATCATATCCTACA
ATGCATGTGCTGCCCAGATGTTCTTCTTTGTAGCCTTTGCTATTACTGAGAATTTTATCCTGGCCTCAAT
GGCCTATGACCGTCATGCAGCAGTGTGCAAACCTTTGCATTACTCCACTACTATGACAACTACGATATGT
GTCTTGCTTCTTGTTGGATCTTACTTGAGTGGACTCTTACACTCTTCCATCCATGTTTCCTTCACATTCC
ATCTTTCCTTCTGTCGTTCTAATGTAGTCAATCACTTCTTCTGTGATATCCCCCCACTATTAGCTGTTTC
TTGCTCCAGTATTCGCACAAATGAAATTATACTCTTCATGTTGGCAGGATTTGATGTGGCTTTTTCACTA
TTGGTTATATTGACCTCTTACTTACTAATTTCTGTTGCAATTGTGAGAATGCGCTCTGCTGAGAGCAGGA
AGAAGGCCATTTCCACCTGTGCATCCCACCTTACCACTGTTTCCATCTTCTATGGAACAATTATCTTCAT
GTACTTACAGCCCAGCTCCAATCACTCCATGGACACTGACAAGATGGCATCTGTTTTCTACACCATGGTC
ATTCCCATGCTGAACCCTCTTGTATATAGCCTGAGAAATAAAGAAGTCAAGAATGCATTCAAGAAGGTTG
CTGGAAAAGCAGTGCTTTCACTGGGATTAATCAATTAA

Translation (315 aa):
MMQNISELSEFILVGLTDAPFLQTPLFIIFTLIYLTTLFGNLGMIMLILLDSRLHTPMYFFLSNLSLVDC
VYASAVTPKVMEGFLTGNKIISYNACAAQMFFFVAFAITENFILASMAYDRHAAVCKPLHYSTTMTTTIC
VLLLVGSYLSGLLHSSIHVSFTFHLSFCRSNVVNHFFCDIPPLLAVSCSSIRTNEIILFMLAGFDVAFSL
LVILTSYLLISVAIVRMRSAESRKKAISTCASHLTTVSIFYGTIIFMYLQPSSNHSMDTDKMASVFYTMV
IPMLNPLVYSLRNKEVKNAFKKVAGKAVLSLGLIN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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