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Report for CCDS30261.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30261.1 Public Mus musculus X Mageb4 23 108 98 CCDS HistoryNCBI Gene:434903Re-query CCDS DB by CCDS ID:30261.1Re-query CCDS DB by GeneID:434903See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30261.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000096378.2 ENSMUSP00000094107.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000096378.2Link to Ensembl Protein Viewer:ENSMUSP00000094107.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000096378Re-query CCDS DB by Protein ID:ENSMUSP00000094107
Original member Current member EBI ENSMUST00000113969.9 ENSMUSP00000109602.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113969.9Link to Ensembl Protein Viewer:ENSMUSP00000109602.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000113969Re-query CCDS DB by Protein ID:ENSMUSP00000109602
Original member Current member NCBI NM_001033492.2 NP_001028664.2 Accepted alive Link to Nucleotide Sequence:NM_001033492.2Link to Protein Sequence:NP_001028664.2Re-query CCDS DB by Nucleotide ID:NM_001033492Re-query CCDS DB by Protein ID:NP_001028664Link to BLAST:NP_001028664.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001028664.2 556 A2A9R3 556 100% 0 0

Chromosomal Locations for CCDS 30261.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 86250751 86252421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1671 nt):
ATGCCCAGGGGACAAAAGAGTAAGGCCCGTGCTCGTGAGAAGCGTCGCCTGGTCCAGGATGAGGCCCAGG
AGCTCCAGGATGCTCAAGCCAAGGCAGGAGAGAAAGGAAAGTCCCCCTCCTGCTCTAATCAGGATTCTGG
AGATGCTGTTGCAAGCACCTCTACTGCTGGCTTCCCTCAAAAGTCTAAATCTCAAGGTGAGGCACCCACC
ACCACTGCTAGGAAAGGTGGTGCCTGCAGAAGATCTCGTAAAAGTACCAGAGGTCCAAGGGAGGAAAGTA
CCAGTTGCACTAGGGTCCCCCGCTTCAGTGAGAATCCACAGAATGATCTTCTAACAAGGAAGACAGGAAT
GCTGATGCAGTACCTGCTCTGCAAGTACAAAATGAAACAGCCAGCATCTAAGGGAGAAATGCTCAAAGTG
ATCAACAGAAGGTTCAAGGAGCAGTTGCCTGAGATCCTCAAGAAAGCCTCTGAGCGCATTCAGCTAGTTT
TTGGTCTTGAGGTGAAAGAAATTAAGCCCAATGGTGGCTACTACACCCTTGTTAGCAAGTTAGATCCCAG
TGTCGGTAATGCTCTGACCACTAGCCTGCCATTTCCCCAGAACGGGCTTTTGATGCCTCTTCTGGGTGTG
ATCTTCTTAAATGGCAACCGTGCCTCTGAGGCAGAGATCTGGGAATTCCTTAATGTCTTGGGAATTTATG
ATGGGAAGGTGCACATAATCTTTGGGGAGCCCCGGAAGCTCATCACCAGAGATCTGGTTAAGGAAAAGTA
CCTGGTATACCAAAAGGAGGCCAACAGTGATCCCCCATCCTTTGAGTTCCTTTGGGGTCCCCGAGCCTAT
GCTGAAACTACCAAGATGAAAATCCTGGAGTTTTTAGCCGAGGTCAATGAGACCGTTCCTCAGGCCTTCC
CAACCCATTATGAGGAGGCTTTGAGAGATCAGGAAGAGAGAGCCCAAGCCGAAGCTGTAGGCAGTCCTGG
CACTAGTGCCAAAGATAAGGCAGAGGCTAAAGTCACACTGGTTGACTCCTCTTGCAAATATCAGGCTGAG
TCTAAAGTCACACTAGTGGACTCTTCTTGTAAAGATCAGGCTGAGTCTAAAGTCACACTTGTTGACCCCT
CTTGCAAAGATAATGCCAAGTCTAAGGTCACACTTGGCTCCTCTCGCAAATACAAGGCCAAGTCTAAAGT
CCCACTGGTTGACTCCTCTTGCAAAGATCAGGCTGAGTCTAAAGTCACACTTGTGGACTCTTGCAAAGAT
CAGGCTGAGTCTAAAGTCACACTAGTGGACTCTTCTTGTAAAGATCAGGCTGAGTCTAAAGTCACACTAG
TGGACTCTTCTTGTAAAGATCAGGCTGAGTCTAAAGTCACACTTGTTGACCCCTCTTGCAAAGATAAGGC
CAAGTCTAAGGTCACACTTGGCTCCTCTCACAAATACAAGGCCAAGTCTAAAGTCACACTGGTTGACTCC
TCTTGCAAAGATCAGGCTGAGTCTAAAGTCACACTAGTGGACTCTTCTTGTAAAGATCAGGCTGAGTCTA
AAGTCACACTTGTTGACCCCTCTTGCAAAGATAATGCCAAGTCTAAGGTCACACTTGGCTCCTCTCGCAA
ATACAAGGCCAAGTCTAAAGTCCCACTGGTTGACTCCTCTGGAAAAGATAAGGCAGTCTAA

Translation (556 aa):
MPRGQKSKARAREKRRLVQDEAQELQDAQAKAGEKGKSPSCSNQDSGDAVASTSTAGFPQKSKSQGEAPT
TTARKGGACRRSRKSTRGPREESTSCTRVPRFSENPQNDLLTRKTGMLMQYLLCKYKMKQPASKGEMLKV
INRRFKEQLPEILKKASERIQLVFGLEVKEIKPNGGYYTLVSKLDPSVGNALTTSLPFPQNGLLMPLLGV
IFLNGNRASEAEIWEFLNVLGIYDGKVHIIFGEPRKLITRDLVKEKYLVYQKEANSDPPSFEFLWGPRAY
AETTKMKILEFLAEVNETVPQAFPTHYEEALRDQEERAQAEAVGSPGTSAKDKAEAKVTLVDSSCKYQAE
SKVTLVDSSCKDQAESKVTLVDPSCKDNAKSKVTLGSSRKYKAKSKVPLVDSSCKDQAESKVTLVDSCKD
QAESKVTLVDSSCKDQAESKVTLVDSSCKDQAESKVTLVDPSCKDKAKSKVTLGSSHKYKAKSKVTLVDS
SCKDQAESKVTLVDSSCKDQAESKVTLVDPSCKDNAKSKVTLGSSRKYKAKSKVPLVDSSGKDKAV


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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