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Report for CCDS30280.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30280.1 Public Mus musculus X Maged1 23 108 98 CCDS HistoryNCBI Gene:94275Re-query CCDS DB by CCDS ID:30280.1Re-query CCDS DB by GeneID:94275See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30280.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000026142.7 ENSMUSP00000026142.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000026142.7Link to Ensembl Protein Viewer:ENSMUSP00000026142.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000026142Re-query CCDS DB by Protein ID:ENSMUSP00000026142
Original member Current member NCBI NM_019791.3 NP_062765.1 Accepted alive Link to Nucleotide Sequence:NM_019791.3Link to Protein Sequence:NP_062765.1Re-query CCDS DB by Nucleotide ID:NM_019791Re-query CCDS DB by Protein ID:NP_062765Link to BLAST:NP_062765.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_062765.1 775 Q9QYH6 775 100% 0 0

Chromosomal Locations for CCDS 30280.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 94535868 94536245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 94536874 94536988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 94537294 94537356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 94537542 94537584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 94537676 94537755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 94537974 94538065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 94538184 94538263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 94538445 94538508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 94538607 94539281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 94539855 94540547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 94541251 94541295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2328 nt):
ATGGCTCAGAAACCGGACGGCGGTGCAGGCCTCCGCGGCTTCCAGGCTGAGGCCTCTGTTGAAGACAGCG
CCTTGCTTGTGCAGACCTTGATGGAAGCCATCCAGATCTCCGAGGCTCCGCCCACCAGCCAGGCCACAGC
AGCTGCCAGTGGGCCAAATGCTAGTCCCCAGAGTTCACAGCCCCCAACTGCCAATGAGAAGGCTGATACT
GAGGTTTCAGCAGCTGCTGCCAGGCCTAAGACAGGCTTTAAGGCCCAGAATGCCACCACAAAGGGGCCAA
ATGATTACTCTCAGGCACGTAATGCCAAGGAGATGCCCAAGAATCAGTCTAAGGCGGCCTTTAAGTCACA
GAATGGCACCCCTAAAGGTCCACATGCTGCCTCTGACTTTTCCCAGGCAGCACCCACAGGCAAATCAGCT
AAAAAGTCTGAAATGGCCTTTAAGGGTCAGAATAGCACTAAGGCTGGCCCCGGTACCACCTACAATTTCC
CTCAGTCTCCCAGTGCCAATGAGATGACCAACAACCAGCCTAAGACAGCTAAGGCTTGGAATGACACTAC
TAAGGTCCCTGGAGCTGATGCCCAGACCCAGAATGTAAATCAGGCCAAAATGGCTGACGTAGGGACCAGC
GCAGGTATCTCTGAAGCTGATGGTGCAGCAGCCCAGACATCAGCAGATGGCTCCCAGACTCAGAACGTGG
AGTCCCGGACTATAATTCGGGGCAAGAGGACCCGCAAGGTTAATAACTTGAATGTGGAAGAGAACAACAG
TGGGGATCAAAGGCGTGCCTCACTGGCCTCAGGGAACTGGAGGTCTGCTCCGGTTCCAGTGACCACTCAG
CAGAACCCACCTGGAGCACCCCCTAATGTGGTGTGGCAGACACCACTGGCTTGGCAGAACCCATCAGGCT
GGCAAAACCAGACAGCCAGGCAGACCCCACCAGCAGCACGTCAGAGTCCCCCAGCTAGGCAGACACCATC
AGCTTGGCAGAACCCAGTTGCATGGCAGAATCCAGTGATCTGGCCTAACCCAGTGATCTGGCAGAATCCA
GTGATCTGGCCAAACCCCATTGTCTGGCCTGGCCCAATTGTCTGGCCAAACCCAATGGCCTGGCAGAGTA
CACCTGGATGGCAGAGCCCACCCAGCTGGCAGGCTCCACCTAGTTGGCAGAGCCCTCAAGATTGGCAGGG
CCCTCCAGATTGGCAGGTACCACCTGACTGGTCAATGCCTCCTGACTGGTCCTTTCCCTCCGACTGGCCT
TTTCCACCTGACTGGATCCCCGCCGACTGGCCAATTCCACCTGACTGGCAGAACTTACGACCCTCACCTA
ATCTGAGATCCTCCTCCAACTCTCGTGCCTCACAGAACCAGGGTCCTCCACAGCCCCGAGATGTGGCCCT
TCTTCAGGAAAGAGCAAATAAGTTGGTCAAGTACCTGATGCTTAAAGACTACACGAAGGTGCCCATCAAG
CGCTCAGAAATGCTGAGGGATATCATCCGAGAATACACTGATGTCTATCCAGAAATCATTGAGCGCGCAT
GCTTTGTCCTGGAGAAGAAATTTGGAATCCAGCTGAAGGAAATCGACAAAGAAGAGCATCTGTATATTCT
CATCAGTACCCCTGAGTCCCTGGCTGGCATACTGGGAACGACCAAAGACACACCGAAGCTTGGCCTCCTC
TTAGTGATTCTGGGCATTATCTTCATGAATGGCAACCGTGCCACCGAGGCCGTCCTCTGGGAAGCACTGC
GCAAGATGGGACTACGTCCTGGGGTGAGACATCCCCTCCTTGGTGACCTGAGAAAACTTCTTACTTACGA
GTTTGTAAAGCAGAAATACCTGGACTATAGACGAGTGCCCAACAGCAACCCTCCTGAGTATGAGTTCCTC
TGGGGCCTCCGCTCCTACCATGAGACTAGCAAGATGAAAGTGCTGAGATTCATTGCAGAGGTTCAGAAGA
GAGACCCTCGTGACTGGACTGCACAGTTCATGGAAGCTGCAGATGAAGCCTTGGATGCTCTGGATGCTGC
TGCAGCTGAGGCAGAGGCCCGGGCTGAAGCGAGAAACCGCATGGGAATTGGAGATGAGGCTGTGTCTGGT
CCCTGGAGCTGGGATGACATTGAGTTTGAGCTGCTGACCTGGGATGAGGAAGGAGATTTTGGAGATCCTT
GGTCCAGGATCCCCTTTACCTTCTGGGCCAGATACCACCAGAATGCCCGCTCCAGGTTTCCCCAGGCCTT
TACTGGCCCCATCATTGGCCCCAGTGGTACTGCCACCGCCAACTTCGCCGCCAACTTCGGTGCCATTGGC
TTCTTCTGGGTTGAGTAA

Translation (775 aa):
MAQKPDGGAGLRGFQAEASVEDSALLVQTLMEAIQISEAPPTSQATAAASGPNASPQSSQPPTANEKADT
EVSAAAARPKTGFKAQNATTKGPNDYSQARNAKEMPKNQSKAAFKSQNGTPKGPHAASDFSQAAPTGKSA
KKSEMAFKGQNSTKAGPGTTYNFPQSPSANEMTNNQPKTAKAWNDTTKVPGADAQTQNVNQAKMADVGTS
AGISEADGAAAQTSADGSQTQNVESRTIIRGKRTRKVNNLNVEENNSGDQRRASLASGNWRSAPVPVTTQ
QNPPGAPPNVVWQTPLAWQNPSGWQNQTARQTPPAARQSPPARQTPSAWQNPVAWQNPVIWPNPVIWQNP
VIWPNPIVWPGPIVWPNPMAWQSTPGWQSPPSWQAPPSWQSPQDWQGPPDWQVPPDWSMPPDWSFPSDWP
FPPDWIPADWPIPPDWQNLRPSPNLRSSSNSRASQNQGPPQPRDVALLQERANKLVKYLMLKDYTKVPIK
RSEMLRDIIREYTDVYPEIIERACFVLEKKFGIQLKEIDKEEHLYILISTPESLAGILGTTKDTPKLGLL
LVILGIIFMNGNRATEAVLWEALRKMGLRPGVRHPLLGDLRKLLTYEFVKQKYLDYRRVPNSNPPEYEFL
WGLRSYHETSKMKVLRFIAEVQKRDPRDWTAQFMEAADEALDALDAAAAEAEARAEARNRMGIGDEAVSG
PWSWDDIEFELLTWDEEGDFGDPWSRIPFTFWARYHQNARSRFPQAFTGPIIGPSGTATANFAANFGAIG
FFWVE


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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