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Report for CCDS30632.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30632.1 Public Homo sapiens 1 NCMAP 24 110 108 CCDS HistoryNCBI Gene:400746Re-query CCDS DB by CCDS ID:30632.1Re-query CCDS DB by GeneID:400746See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30632.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000374392.3 ENSP00000363513.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000374392.3Link to Ensembl Protein Viewer:ENSP00000363513.2Re-query CCDS DB by Nucleotide ID:ENST00000374392Re-query CCDS DB by Protein ID:ENSP00000363513
Original member Current member NCBI NM_001010980.5 NP_001010980.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001010980.5Link to Protein Sequence:NP_001010980.1Re-query CCDS DB by Nucleotide ID:NM_001010980Re-query CCDS DB by Protein ID:NP_001010980Link to BLAST:NP_001010980.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001010980.1 102 Q5T1S8 102 100% 0 0

Chromosomal Locations for CCDS 30632.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 24595431 24595512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 24600940 24601024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 24605606 24605747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (309 nt):
ATGACCACAGCCACCCCTCTGGGGGATACCACCTTCTTCTCACTGAACATGACCACCAGGGGAGAAGACT
TCCTGTATAAGAGTTCTGGAGCCATTGTTGCTGCCGTTGTGGTGGTTGTCATCATCATCTTCACCGTGGT
TCTGATCCTGCTGAAGATGTACAACAGGAAAATGAGGACGAGGCGGGAACTAGAGCCCAAGGGCCCCAAG
CCAACCGCCCCTTCTGCCGTGGGCCCAAACAGCAACGGCAGCCAACACCCAGCAACTGTGACCTTCAGTC
CTGTTGACGTCCAGGTGGAGACGCGATGA

Translation (102 aa):
MTTATPLGDTTFFSLNMTTRGEDFLYKSSGAIVAAVVVVVIIIFTVVLILLKMYNRKMRTRRELEPKGPK
PTAPSAVGPNSNGSQHPATVTFSPVDVQVETR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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