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Report for CCDS30914.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30914.1 Public Homo sapiens 1 CFAP45 24 110 108 CCDS HistoryNCBI Gene:25790Re-query CCDS DB by CCDS ID:30914.1Re-query CCDS DB by GeneID:25790See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30914.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000368099.9 ENSP00000357079.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000368099.9Link to Ensembl Protein Viewer:ENSP00000357079.4Re-query CCDS DB by Nucleotide ID:ENST00000368099Re-query CCDS DB by Protein ID:ENSP00000357079
Original member Current member NCBI NM_012337.3 NP_036469.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012337.3Link to Protein Sequence:NP_036469.2Re-query CCDS DB by Nucleotide ID:NM_012337Re-query CCDS DB by Protein ID:NP_036469Link to BLAST:NP_036469.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036469.2 551 Q9UL16-1 551 100% 0 0

Chromosomal Locations for CCDS 30914.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 159872485 159872563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159872944 159873168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159876556 159876749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159877349 159877462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159880554 159880700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159884436 159884565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159886511 159886689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159887841 159888011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159888352 159888496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159890480 159890622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159893180 159893305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159900096 159900098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1656 nt):
ATGCCACTAAGCACAGCTGGCATCCTGAGCTCCTCTTCTGCCGCTTCCAACAGGTCAAGGAATAAGGCTC
GCTATCGGACCAAAGCCGTGAGCTCTGAGGTGGATGAGAGCCTCTTTGGAGATATCAAGTCCCCAGCCCA
GGGCCAGAGCGACAGCCCCATTGTGCTGCTCCGAGATAAGCATACCCTTCAAAAAACTCTCACTGCTTTG
GGCTTGGATCGCAAGCCAGAGACCATCCAGCTCATCACCCGGGACATGGTCCGAGAACTCATTGTTCCCA
CAGAGGATCCCTCCGGGGAGTCCCTAATCATCAGCCCTGAGGAGTTTGAGCGAATCAAATGGGCATCCCA
TGTCCTGACCAGAGAAGAACTTGAGGCCAGGGACCAGGCCTTCAAGAAGGAGAAGGAAGCCACCATGGAT
GCAGTGATGACACGAAAGAAGATCATGAAACAGAAGGAGATGGTGTGGAACAACAACAAGAAGCTCAGTG
ACCTGGAGGAGGTGGCCAAGGAACGGGCCCAGAACCTCCTGCAGAGAGCCAACAAGCTGCGGATGGAGCA
GGAGGAGGAGCTCAAGGACATGAGCAAGATTATCCTCAATGCTAAGTGCCATGCCATCCGGGATGCCCAA
ATCCTGGAGAAGCAGCAGATCCAAAAAGAACTGGACACAGAAGAGAAGCGGTTGGATCAGATGATGGAAG
TGGAGCGGCAGAAATCCATTCAAAGGCAGGAGGAACTGGAGAGGAAGAGGAGGGAGGAAAGAATTAGAGG
AAGGCGGCAAATTGTGGAACAGATGGAAAAGAACCAGGAGGAGCGATCGCTGCTTGCTGAGCAGCGGGAG
CAGGAGAAGGAGCAGATGCTGGAATATATGGAACAGCTCCAAGAGGAAGATCTAAAGGACATGGAACGAA
GGCAGCAACAAAAACTGAAGATGCAAGCTGAGATTAAGCGCATCAATGATGAAAACCAGAAACAGAAAGC
AGAACTGCTGGCTCAGGAGAAGCTGGCAGACCAGATGGTGATGGAGTTTACCAAGAAGAAGATGGCTCGA
GAAGCAGAGTTTGAGGCTGAGCAGGAGAGAATCCGGAGGGAGAAAGAGAAGGAGATCGCACGCTTGAGGG
CCATGCAGGAGAAGGCCCAGGATTACCAGGCAGAACAGGATGCCTTGCGGGCCAAGCGCAACCAGGAGGT
TGCAGACAGAGAGTGGCGCAGAAAGGAAAAGGAAAATGCGCGGAAGAAGATGGAAACAGAGGCTGAGCTG
CGAAAAAGTCGGCTCGAACAGGTGGCTTTCAAGGAGCACGCTCTGGCTGTTCAGGTGCAACGGGACCGGG
ATGAGTTCGAGAGGATTCTTCGGGCTCAGAGAGAACAGATTGAGAAGGAGCGGCTGGAGGAGGAGAAAAA
GGCCACAGGGCGCTTACAGCATGCCAATGAGCTCCGGCGCCAGGTGCGCGAGAACCAGCAGAAGGAAGTG
CAGAACCGGATTGCCACCTTTGAGGAGGGCCGGCGCCTCAAAGAGGAGGCCCAGAAACGCCGTGAGCGCA
TCGATGAGATCAAGAGGAAAAAGCTTGAAGAGCTGAGAGCCACTGGCCTTCCCGAGAAGTACTGCATTGA
AGCTGAGCGCAAAGCTAACATCCTGCCAGCTACCTCTGTGAACTGA

Translation (551 aa):
MPLSTAGILSSSSAASNRSRNKARYRTKAVSSEVDESLFGDIKSPAQGQSDSPIVLLRDKHTLQKTLTAL
GLDRKPETIQLITRDMVRELIVPTEDPSGESLIISPEEFERIKWASHVLTREELEARDQAFKKEKEATMD
AVMTRKKIMKQKEMVWNNNKKLSDLEEVAKERAQNLLQRANKLRMEQEEELKDMSKIILNAKCHAIRDAQ
ILEKQQIQKELDTEEKRLDQMMEVERQKSIQRQEELERKRREERIRGRRQIVEQMEKNQEERSLLAEQRE
QEKEQMLEYMEQLQEEDLKDMERRQQQKLKMQAEIKRINDENQKQKAELLAQEKLADQMVMEFTKKKMAR
EAEFEAEQERIRREKEKEIARLRAMQEKAQDYQAEQDALRAKRNQEVADREWRRKEKENARKKMETEAEL
RKSRLEQVAFKEHALAVQVQRDRDEFERILRAQREQIEKERLEEEKKATGRLQHANELRRQVRENQQKEV
QNRIATFEEGRRLKEEAQKRRERIDEIKRKKLEELRATGLPEKYCIEAERKANILPATSVN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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