NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS31264.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31264.1 Public Homo sapiens 10 ZFYVE27 24 110 108 CCDS HistoryNCBI Gene:118813Re-query CCDS DB by CCDS ID:31264.1Re-query CCDS DB by GeneID:118813See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31264.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000359980.5 ENSP00000353069.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000359980.5Link to Ensembl Protein Viewer:ENSP00000353069.3Re-query CCDS DB by Nucleotide ID:ENST00000359980Re-query CCDS DB by Protein ID:ENSP00000353069
Original member Current member NCBI NM_001002262.4 NP_001002262.1 Accepted alive Link to Nucleotide Sequence:NM_001002262.4Link to Protein Sequence:NP_001002262.1Re-query CCDS DB by Nucleotide ID:NM_001002262Re-query CCDS DB by Protein ID:NP_001002262Link to BLAST:NP_001002262.1
Original member Current member NCBI NM_001385880.1 NP_001372809.1 Accepted alive Link to Nucleotide Sequence:NM_001385880.1Link to Protein Sequence:NP_001372809.1Re-query CCDS DB by Nucleotide ID:NM_001385880Re-query CCDS DB by Protein ID:NP_001372809Link to BLAST:NP_001372809.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001002262.1 404 Q5T4F4-2 404 100% 0 0
NP_001372809.1 404 Q5T4F4-2 404 100% 0 0

Chromosomal Locations for CCDS 31264.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 97738478 97738674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97743094 97743164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97744729 97744915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97748269 97748364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97749474 97749586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97750331 97750470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97751391 97751462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97753038 97753182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97757265 97757311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97757642 97757723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97759236 97759300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1215 nt):
ATGCAGACATCAGAACGTGAGGGGAGTGGGCCGGAGCTGAGCCCCAGCGTGATGCCCGAGGCTCCCCTGG
AGTCTCCACCTTTTCCTACCAAGTCCCCAGCGTTTGACCTTTTCAACTTGGTTCTCTCCTACAAGAGGCT
GGAGATCTACCTGGAACCCTTGAAGGATGCAGGTGATGGTGTTCGATACTTGCTCAGGTGGCAGATGCCT
TTGTGTTCCTTGCTGACCTGCCTGGGCCTCAACGTCTTGTTCCTCACTTTGAATGAGGGTGCATGGTACT
CAGTAGGTGCCCTGATGATTTCAGTGCCCGCCCTGCTGGGCTACCTTCAGGAGGTTTGCCGGGCACGGCT
GCCTGATTCCGAGCTGATGCGGAGGAAGTATCATAGCGTGAGGCAGGAGGACCTGCAGAGAGGTCGCCTG
TCTCGTCCCGAGGCCGTGGCTGAGGTGAAGAGCTTCTTGATCCAGCTGGAGGCCTTCCTGAGCCGCCTGT
GCTGCACATGTGAAGCCGCCTACCGCGTGCTGCACTGGGAGAACCCCGTCGTGTCCTCACAGTTCTATGG
GGCTCTTCTGGGCACAGTCTGCATGCTGTATTTGCTGCCACTCTGCTGGGTTCTCACCCTTTTAAACAGC
ACGCTCTTTCTGGGGAATGTGGAGTTCTTCCGAGTTGTGTCTGAGTACAGGGCATCTCTGCAGCAGAGGA
TGAACCCAAAGCAGGAAGAGCATGCCTTTGAGAGTCCTCCACCACCAGATGTTGGGGGGAAGGATGGTCT
GATGGACAGCACGCCTGCCCTCACACCCACGGAGGACCTCACACCGGGCAGCGTGGAGGAGGCTGAGGAG
GCTGAGCCAGATGAAGAGTTTAAAGATGCGATTGAGGAGGATGATGAGGGCGCCCCGTGCCCAGCAGAGG
ATGAGCTGGCCCTGCAGGACAACGGGTTCCTGAGCAAGAATGAGGTGCTGCGCAGCAAGGTGTCTCGGCT
CACGGAGCGGCTCCGCAAGCGCTACCCCACCAACAACTTCGGGAACTGCACGGGCTGCTCGGCCACCTTC
TCAGTGCTGAAGAAGAGGCGGAGCTGCAGTAATTGTGGAAACAGCTTCTGCTCTCGATGCTGCTCCTTCA
AGGTGCCCAAGTCCTCCATGGGGGCCACAGCCCCTGAAGCCCAGAGGGAGACTGTGTTTGTGTGTGCCTC
GTGTAACCAGACCTTGAGCAAGTGA

Translation (404 aa):
MQTSEREGSGPELSPSVMPEAPLESPPFPTKSPAFDLFNLVLSYKRLEIYLEPLKDAGDGVRYLLRWQMP
LCSLLTCLGLNVLFLTLNEGAWYSVGALMISVPALLGYLQEVCRARLPDSELMRRKYHSVRQEDLQRGRL
SRPEAVAEVKSFLIQLEAFLSRLCCTCEAAYRVLHWENPVVSSQFYGALLGTVCMLYLLPLCWVLTLLNS
TLFLGNVEFFRVVSEYRASLQQRMNPKQEEHAFESPPPPDVGGKDGLMDSTPALTPTEDLTPGSVEEAEE
AEPDEEFKDAIEEDDEGAPCPAEDELALQDNGFLSKNEVLRSKVSRLTERLRKRYPTNNFGNCTGCSATF
SVLKKRRSCSNCGNSFCSRCCSFKVPKSSMGATAPEAQRETVFVCASCNQTLSK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH