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Report for CCDS31852.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31852.1 Public Homo sapiens 12 XPOT 24 110 108 CCDS HistoryNCBI Gene:11260Re-query CCDS DB by CCDS ID:31852.1Re-query CCDS DB by GeneID:11260See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31852.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000332707.10 ENSP00000327821.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000332707.10Link to Ensembl Protein Viewer:ENSP00000327821.5Re-query CCDS DB by Nucleotide ID:ENST00000332707Re-query CCDS DB by Protein ID:ENSP00000327821
Original member Current member NCBI NM_007235.6 NP_009166.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_007235.6Link to Protein Sequence:NP_009166.2Re-query CCDS DB by Nucleotide ID:NM_007235Re-query CCDS DB by Protein ID:NP_009166Link to BLAST:NP_009166.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_009166.2 962 O43592 962 100% 0 0

Chromosomal Locations for CCDS 31852.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 64410036 64410095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64414907 64414989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64416698 64416754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64418046 64418115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64418876 64419094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64420070 64420254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64420353 64420521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64421235 64421471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64423005 64423043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64423182 64423244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64424599 64424723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64425038 64425182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64425338 64425457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64425815 64425909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64428051 64428120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64430049 64430287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64431538 64431823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64433414 64433603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64434507 64434623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64434794 64434909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64435627 64435674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64439244 64439315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64445075 64445131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64448105 64448131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2889 nt):
ATGGATGAACAGGCTCTATTAGGGCTAAATCCAAATGCTGATTCAGACTTTAGACAAAGGGCCCTGGCCT
ATTTTGAGCAGTTAAAAATTTCCCCAGATGCCTGGCAGGTGTGTGCAGAAGCTCTAGCCCAGAGGACATA
CAGTGATGATCATGTGAAGTTTTTCTGCTTTCAAGTACTGGAACATCAAGTTAAATACAAATACTCAGAA
CTAACCACTGTTCAACAACAGCTAATTAGGGAGACGCTCATATCATGGCTGCAAGCTCAGATGCTGAATC
CCCAACCAGAGAAGACCTTTATACGAAATAAAGCCGCCCAAGTCTTCGCCTTGCTTTTTGTTACAGAGTA
TCTCACTAAGTGGCCCAAGTTTTTTTTTGACATTCTCTCAGTAGTGGACCTAAATCCAAGGGGAGTAGAT
CTCTACCTGCGAATCCTCATGGCTATTGATTCAGAGTTGGTGGATCGTGATGTGGTGCATACATCAGAGG
AGGCTCGTAGGAATACTCTCATAAAAGATACCATGAGGGAACAGTGCATTCCAAATCTGGTGGAATCATG
GTACCAAATATTACAAAATTATCAGTTTACTAATTCTGAAGTGACGTGTCAGTGCCTTGAAGTAGTTGGG
GCTTATGTCTCTTGGATAGACTTATCCCTTATAGCCAATGATAGGTTTATAAATATGCTGCTAGGTCATA
TGTCAATAGAAGTTCTACGGGAAGAAGCATGTGACTGTTTATTTGAAGTTGTAAATAAAGGAATGGACCC
TGTTGATAAAATGAAACTAGTGGAATCTTTGTGTCAAGTATTACAGTCTGCTGGGTTTTTCAGCATTGAC
CAGGAAGAAGATGTTGACTTCCTGGCCAGATTTTCTAAGTTGGTAAATGGAATGGGACAGTCATTGATAG
TTAGTTGGAGTAAATTAATTAAGAATGGGGATATTAAGAATGCTCAAGAGGCACTACAAGCTATTGAAAC
AAAAGTGGCACTGATGTTGCAGCTACTAATTCATGAGGATGATGATATTTCTTCTAATATTATTGGATTT
TGTTACGATTATCTTCATATTTTGAAACAGCTTACAGTGCTCTCGGATCAGCAAAAAGCTAATGTAGAGG
CAATCATGTTGGCCGTTATGAAAAAATTGACTTACGATGAAGAATATAACTTTGAAAATGAGGGTGAAGA
TGAAGCCATGTTTGTAGAATATAGAAAACAACTGAAGTTACTGTTGGACAGGCTTGCTCAAGTTTCACCA
GAGTTACTACTGGCCTCTGTTCGCAGAGTTTTTAGTTCTACACTGCAGAATTGGCAGACTACACGGTTTA
TGGAAGTTGAAGTAGCAATAAGATTGCTGTATATGTTGGCAGAAGCTCTTCCAGTATCTCATGGTGCTCA
CTTCTCAGGTGATGTTTCAAAAGCTAGTGCTTTGCAGGATATGATGCGAACTCTGGTAACATCAGGAGTC
AGTTCCTATCAGCATACATCTGTGACATTGGAGTTCTTCGAAACTGTTGTTAGATATGAAAAGTTTTTCA
CAGTTGAACCTCAGCACATTCCATGTGTACTAATGGCTTTCTTAGATCACAGAGGTCTGCGGCATTCCAG
TGCAAAAGTTCGGAGCAGGACGGCTTACCTGTTTTCTAGATTTGTCAAATCTCTCAATAAGCAAATGAAT
CCTTTCATTGAGGATATTTTGAATAGAATACAAGATTTATTAGAGCTTTCTCCACCTGAGAATGGCCACC
AGTCCTTACTGAGCAGCGATGATCAACTTTTTATTTATGAGACAGCTGGAGTGCTGATTGTTAATAGTGA
ATATCCGGCAGAAAGGAAACAAGCCTTAATGAGGAATCTGTTGACTCCACTAATGGAGAAGTTTAAAATT
CTGTTAGAAAAGTTGATGCTGGCACAAGATGAAGAAAGGCAAGCCTCTCTAGCAGACTGTCTTAACCATG
CTGTTGGATTTGCAAGTCGAACCAGTAAAGCTTTCAGCAACAAACAGACTGTGAAACAATGTGGCTGTTC
CGAAGTTTATCTGGACTGTTTACAGACATTCTTGCCAGCCCTCAGTTGTCCCTTACAAAAGGATATTCTC
AGAAGTGGAGTCCGTACTTTCCTTCATCGAATGATTATTTGCCTGGAGGAAGAAGTTCTTCCGTTCATTC
CATCTGCTTCAGAACATATGCTCAAAGATTGTGAAGCAAAAGATCTCCAGGAGTTCATTCCTCTTATCAA
CCAGATTACGGCCAAATTCAAGATACAGGTATCCCCGTTTTTACAACAGATGTTCATGCCCCTGCTTCAT
GCAATTTTTGAAGTGCTGCTCCGGCCAGCAGAAGAAAATGACCAGTCTGCTGCTTTAGAGAAGCAGATGT
TGCGGAGGAGTTACTTTGCTTTCCTGCAAACAGTCACAGGCAGTGGGATGAGCGAAGTTATAGCAAATCA
AGGTGCAGAGAATGTAGAAAGAGTGTTGGTTACTGTTATCCAAGGAGCAGTTGAATATCCAGATCCAATT
GCACAGAAAACATGTTTTATCATCCTCTCAAAGTTGGTAGAACTCTGGGGAGGTAAAGATGGACCAGTGG
GATTTGCTGATTTTGTTTATAAGCACATTGTCCCCGCATGTTTCCTAGCACCTTTAAAACAAACCTTTGA
CCTGGCAGATGCACAAACAGTATTGGCTTTATCTGAGTGTGCAGTGACACTGAAAACAATTCATCTCAAA
CGGGGCCCAGAATGTGTTCAGTATCTTCAACAAGAATACCTGCCCTCCTTGCAAGTAGCTCCAGAAATAA
TTCAGGAGTTTTGTCAAGCGCTTCAGCAGCCTGATGCTAAAGTTTTTAAAAATTACTTAAAGGTGTTCTT
CCAGAGAGCAAAGCCCTGA

Translation (962 aa):
MDEQALLGLNPNADSDFRQRALAYFEQLKISPDAWQVCAEALAQRTYSDDHVKFFCFQVLEHQVKYKYSE
LTTVQQQLIRETLISWLQAQMLNPQPEKTFIRNKAAQVFALLFVTEYLTKWPKFFFDILSVVDLNPRGVD
LYLRILMAIDSELVDRDVVHTSEEARRNTLIKDTMREQCIPNLVESWYQILQNYQFTNSEVTCQCLEVVG
AYVSWIDLSLIANDRFINMLLGHMSIEVLREEACDCLFEVVNKGMDPVDKMKLVESLCQVLQSAGFFSID
QEEDVDFLARFSKLVNGMGQSLIVSWSKLIKNGDIKNAQEALQAIETKVALMLQLLIHEDDDISSNIIGF
CYDYLHILKQLTVLSDQQKANVEAIMLAVMKKLTYDEEYNFENEGEDEAMFVEYRKQLKLLLDRLAQVSP
ELLLASVRRVFSSTLQNWQTTRFMEVEVAIRLLYMLAEALPVSHGAHFSGDVSKASALQDMMRTLVTSGV
SSYQHTSVTLEFFETVVRYEKFFTVEPQHIPCVLMAFLDHRGLRHSSAKVRSRTAYLFSRFVKSLNKQMN
PFIEDILNRIQDLLELSPPENGHQSLLSSDDQLFIYETAGVLIVNSEYPAERKQALMRNLLTPLMEKFKI
LLEKLMLAQDEERQASLADCLNHAVGFASRTSKAFSNKQTVKQCGCSEVYLDCLQTFLPALSCPLQKDIL
RSGVRTFLHRMIICLEEEVLPFIPSASEHMLKDCEAKDLQEFIPLINQITAKFKIQVSPFLQQMFMPLLH
AIFEVLLRPAEENDQSAALEKQMLRRSYFAFLQTVTGSGMSEVIANQGAENVERVLVTVIQGAVEYPDPI
AQKTCFIILSKLVELWGGKDGPVGFADFVYKHIVPACFLAPLKQTFDLADAQTVLALSECAVTLKTIHLK
RGPECVQYLQQEYLPSLQVAPEIIQEFCQALQQPDAKVFKNYLKVFFQRAKP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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