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Report for CCDS32030.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32030.2 Public Homo sapiens 14 OR4K17 24 110 108 CCDS HistoryNCBI Gene:390436Re-query CCDS DB by CCDS ID:32030.2Re-query CCDS DB by GeneID:390436See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 32030.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000641633.2 ENSP00000493115.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000641633.2Link to Ensembl Protein Viewer:ENSP00000493115.2Re-query CCDS DB by Nucleotide ID:ENST00000641633Re-query CCDS DB by Protein ID:ENSP00000493115
Original member Current member EBI ENST00000641386.2 ENSP00000493449.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000641386.2Link to Ensembl Protein Viewer:ENSP00000493449.2Re-query CCDS DB by Nucleotide ID:ENST00000641386Re-query CCDS DB by Protein ID:ENSP00000493449
Original member Current member NCBI NM_001004715.5 NP_001004715.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004715.5Link to Protein Sequence:NP_001004715.3Re-query CCDS DB by Nucleotide ID:NM_001004715Re-query CCDS DB by Protein ID:NP_001004715Link to BLAST:NP_001004715.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004715.3 312 Q8NGC6 312 100% 0 0

Chromosomal Locations for CCDS 32030.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 20117500 20118438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGAAACTATTAAATCAATCTCAAGTGTCAGAATTCATTTTGCTGGGACTGACCAGCTCCCAGGATGTAG
AGTTTCTTCTCTTTGCCCTCTTCTCGGTTATCTATGTGGTCACAGTTTTGGGTAACCTTCTTATTATAGT
CACAGTGTTTAACACCCCTAACCTGAATACTCCCATGTATTTTCTCCTTGGTAATCTCTCTTTTGTAGAT
ATGACCCTTGCTTCTTTTGCCACCCCTAAGGTGATTCTGAACTTGTTAAAAAAGCAGAAGGTAATTTCTT
TTGCTGGGTGCTTCACTCAGATATTTCTCCTTCACTTACTGGGTGGGGTTGAAATGGTACTGTTGGTCTC
CATGGCTTTTGACAGATATGTGGCCATTTGTAAGCCCCTACACTACATGACCATCATGAACAAGAAGGTA
TGTGTTTTGCTTGTAGTGACCTCATGGCTCTTGGGTCTCCTTCACTCAGGGTTTCAGATACCATTTGCTG
TGAACTTGCCCTTTTGTGGTCCCAATGTGGTAGACAGCATTTTTTGTGACCTCCCTTTGGTTACTAAGCT
TGCCTGTATAGACATATATTTTGTACAGGTAGTCATTGTTGCCAACAGTGGCATAATCTCCCTGAGCTGT
TTCATTATTTTGCTTATCTCCTACAGTCTGATCCTCATAACCATTAAGAACCACTCTCCTACTGGGCAAT
CTAAAGCCCGTTCCACTTTGACTGCTCACATCACAGTGGTGATTCTCTTCTTTGGCCCATGCATCTTTAT
CTACATTTGGCCCTTCGGCAACCACTCTGTAGATAAGTTCCTTGCTGTGTTTTATACCATCATCACTCCT
ATCTTGAATCCAATTATCTATACTCTGAGAAACAAAGAAATGAAGATATCCATGAAAAAACTCTGGAGAG
CTTTTGTGAATTCTAGAGAAGATACTTAG

Translation (312 aa):
MKLLNQSQVSEFILLGLTSSQDVEFLLFALFSVIYVVTVLGNLLIIVTVFNTPNLNTPMYFLLGNLSFVD
MTLASFATPKVILNLLKKQKVISFAGCFTQIFLLHLLGGVEMVLLVSMAFDRYVAICKPLHYMTIMNKKV
CVLLVVTSWLLGLLHSGFQIPFAVNLPFCGPNVVDSIFCDLPLVTKLACIDIYFVQVVIVANSGIISLSC
FIILLISYSLILITIKNHSPTGQSKARSTLTAHITVVILFFGPCIFIYIWPFGNHSVDKFLAVFYTIITP
ILNPIIYTLRNKEMKISMKKLWRAFVNSREDT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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