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Report for CCDS32430.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32430.2 Public Homo sapiens 16 BOLA2B 24 110 108 CCDS HistoryNCBI Gene:654483Re-query CCDS DB by CCDS ID:32430.2Re-query CCDS DB by GeneID:654483See the combined annotation on chromosome 16 in Sequence Viewer

Public Note for CCDS 32430.1
This CCDS was updated to trim the coding region at the 5' end, which reduces the protein size to 86aa. The update is supported by conservation and proteomics data.

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 32430.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000651894.2 ENSP00000498355.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000651894.2Link to Ensembl Protein Viewer:ENSP00000498355.1Re-query CCDS DB by Nucleotide ID:ENST00000651894Re-query CCDS DB by Protein ID:ENSP00000498355
Original member Current member NCBI NM_001039182.4 NP_001034271.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001039182.4Link to Protein Sequence:NP_001034271.2Re-query CCDS DB by Nucleotide ID:NM_001039182Re-query CCDS DB by Protein ID:NP_001034271Link to BLAST:NP_001034271.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001034271.2 86 Q9H3K6-1 86 100% 0 0

Chromosomal Locations for CCDS 32430.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 30192975 30193074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30193358 30193455 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30193533 30193595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (261 nt):
ATGGAACTCAGCGCCGAATACCTCCGCGAGAAGCTGCAGCGGGACCTGGAGGCGGAGCATGTGGAGGTGG
AGGACACGACCCTCAACCGTTGCTCCTGTAGCTTCCGAGTCCTGGTGGTGTCGGCCAAGTTCGAGGGGAA
ACCGCTGCTTCAGAGACACAGGCTGGTGAACGCGTGCCTAGCAGAAGAGCTCCCGCACATCCATGCCTTT
GAACAGAAAACCCTGACCCCAGACCAGTGGGCACGTGAGCGACAGAAATGA

Translation (86 aa):
MELSAEYLREKLQRDLEAEHVEVEDTTLNRCSCSFRVLVVSAKFEGKPLLQRHRLVNACLAEELPHIHAF
EQKTLTPDQWARERQK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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