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Report for CCDS32880.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32880.1 Public Homo sapiens 19 DUS3L 24 110 108 CCDS HistoryNCBI Gene:56931Re-query CCDS DB by CCDS ID:32880.1Re-query CCDS DB by GeneID:56931See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32880.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000309061.12 ENSP00000311977.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000309061.12Link to Ensembl Protein Viewer:ENSP00000311977.5Re-query CCDS DB by Nucleotide ID:ENST00000309061Re-query CCDS DB by Protein ID:ENSP00000311977
Original member Current member NCBI NM_020175.3 NP_064560.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020175.3Link to Protein Sequence:NP_064560.2Re-query CCDS DB by Nucleotide ID:NM_020175Re-query CCDS DB by Protein ID:NP_064560Link to BLAST:NP_064560.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_064560.2 650 Q96G46-1 650 100% 0 0

Chromosomal Locations for CCDS 32880.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 5785203 5785275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5785383 5785511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5785603 5785791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5786467 5786542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5786749 5786845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5787061 5787171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5787296 5787361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5787589 5787705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5788024 5788176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5788357 5788398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5789207 5789719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5790047 5790335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5791044 5791141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1953 nt):
ATGGCGGAGGGAACGGCGGAGGCTCCTCTAGAGAATGGTGGTGGTGGCGACTCGGGAGCCGGAGCTTTGG
AACGAGGAGTGGCGCCCATTAAGCGTCAATACCTCACCACCAAGGAGCAGTTTCACCAATTCCTGGAAGC
CAAAGGGCAGGAGAAGACTTGCCGGGAAACCGAGGTAGGAGACCCTGCTGGCAATGAGCTGGCTGAGCCT
GAGGCTAAGCGGATCCGACTGGAGGATGGACAGACGGCGGACGGGCAGACGGAGGAGGCAGCAGAGCCCG
GGGAGCAGCTACAGACTCAGAAGAGGGCCCGGGGACAAAACAAGGGCCGGCCCCATGTGAAGCCCACGAA
CTACGACAAGAACAGGCTGTGTCCCTCCCTAATCCAGGAGTCGGCTGCTAAGTGTTTCTTCGGTGATCGC
TGCCGCTTTCTGCACGACGTGGGGCGCTACCTGGAGACCAAGCCGGCCGACCTGGGCCCCCGCTGCGTGC
TCTTCGAGACCTTCGGCCGGTGCCCCTACGGCGTGACCTGCCGCTTCGCTGGGGCCCACCTGAGGCCCGA
GGGACAGAACCTGGTGCAGGAGGAGTTGGCGGCCCGCGGGACCCAGCCCCCGTCCATCCGCAACGGCCTG
GACAAAGCCCTGCAGCAGCAGCTGCGGAAGCGCGAGGTCCGCTTCGAGCGAGCTGAGCAGGCCCTGCGCC
GGTTCAGCCAGGGCCCCACACCCGCTGCCGCTGTCCCCGAGGGCACGGCAGCCGAGGGCGCTCCCAGGCA
GGAAAACTGTGGTGCCCAGCAGGTCCCCGCAGGGCCGGGCACTAGCACCCCTCCCAGCAGCCCCGTGCGG
ACCTGCGGGCCCCTGACGGATGAGGACGTGGTCAGGCTGCGGCCCTGTGAGAAGAAGCGGCTGGACATCC
GTGGCAAACTTTACCTGGCCCCCCTCACCACGTGTGGGAACCTGCCCTTCCGACGGATCTGCAAGCGCTT
CGGGGCGGATGTGACATGTGGAGAGATGGCCGTCTGCACCAACCTGCTGCAGGGCCAGATGTCCGAGTGG
GCCCTACTCAAACGCCACCAGTGTGAGGACATCTTTGGCGTCCAGCTGGAGGGCGCCTTCCCCGACACCA
TGACCAAGTGTGCCGAGCTGCTGAGCCGCACCGTGGAGGTGGACTTTGTGGACATCAACGTCGGCTGCCC
CATCGACCTCGTGTACAAGAAGGGTGGGGGCTGTGCCCTCATGAATCGCTCCACCAAGTTCCAGCAGATC
GTCCGTGGCATGAACCAGGTGCTGGATGTGCCGCTGACTGTGAAGATCCGCACAGGCGTCCAGGAGCGTG
TGAACCTGGCGCACCGCCTGCTGCCCGAGCTGCGGGACTGGGGCGTGGCACTCGTCACGCTCCACGGCCG
CTCTCGGGAGCAGCGCTACACCAAGCTAGCCGACTGGCAGTACATCGAGGAGTGCGTGCAGGCCGCCAGC
CCCATGCCCCTGTTCGGAAATGGGGACATCTTGTCATTTGAGGATGCCAACCGCGCCATGCAGACTGGTG
TCACCGGGATCATGATTGCCCGTGGCGCCCTGCTCAAGCCGTGGCTCTTCACGGAGATCAAGGAGCAGCG
GCACTGGGACATCTCGTCGTCCGAGCGCCTGGACATCCTGCGGGACTTCACCAACTACGGCCTGGAGCAC
TGGGGCTCGGACACGCAGGGCGTGGAGAAGACCCGGCGCTTTCTGCTCGAGTGGCTGTCCTTCCTGTGCC
GGTACGTGCCCGTGGGGCTGCTGGAGCGGCTCCCACAGAGGATCAACGAGCGGCCGCCCTACTACCTGGG
CCGCGACTACCTGGAGACGCTGATGGCCAGCCAGAAGGCAGCCGACTGGATCCGCATCAGCGAGATGCTC
CTTGGGCCAGTGCCCCCCAGCTTCGCCTTCTTGCCGAAGCACAAGGCCAACGCGTACAAGTAG

Translation (650 aa):
MAEGTAEAPLENGGGGDSGAGALERGVAPIKRQYLTTKEQFHQFLEAKGQEKTCRETEVGDPAGNELAEP
EAKRIRLEDGQTADGQTEEAAEPGEQLQTQKRARGQNKGRPHVKPTNYDKNRLCPSLIQESAAKCFFGDR
CRFLHDVGRYLETKPADLGPRCVLFETFGRCPYGVTCRFAGAHLRPEGQNLVQEELAARGTQPPSIRNGL
DKALQQQLRKREVRFERAEQALRRFSQGPTPAAAVPEGTAAEGAPRQENCGAQQVPAGPGTSTPPSSPVR
TCGPLTDEDVVRLRPCEKKRLDIRGKLYLAPLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQMSEW
ALLKRHQCEDIFGVQLEGAFPDTMTKCAELLSRTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKFQQI
VRGMNQVLDVPLTVKIRTGVQERVNLAHRLLPELRDWGVALVTLHGRSREQRYTKLADWQYIEECVQAAS
PMPLFGNGDILSFEDANRAMQTGVTGIMIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTNYGLEH
WGSDTQGVEKTRRFLLEWLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQKAADWIRISEML
LGPVPPSFAFLPKHKANAYK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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