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Report for CCDS33116.3 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33116.3 Public Homo sapiens 19 ZNF628 24 110 108 CCDS HistoryNCBI Gene:89887Re-query CCDS DB by CCDS ID:33116.3Re-query CCDS DB by GeneID:89887See the combined annotation on chromosome 19 in Sequence Viewer

Public Note for CCDS 33116.2
The coding region has been updated to extend the N-terminus to one that is more supported by the available transcript data and by conservation in some primates.

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 33116.3

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000598519.2 ENSP00000469591.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000598519.2Link to Ensembl Protein Viewer:ENSP00000469591.1Re-query CCDS DB by Nucleotide ID:ENST00000598519Re-query CCDS DB by Protein ID:ENSP00000469591
Original member Current member NCBI NM_033113.3 NP_149104.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033113.3Link to Protein Sequence:NP_149104.3Re-query CCDS DB by Nucleotide ID:NM_033113Re-query CCDS DB by Protein ID:NP_149104Link to BLAST:NP_149104.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_149104.3 1059 Q5EBL2 1059 100% 0 0

Chromosomal Locations for CCDS 33116.3

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 55479911 55479917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55481201 55484373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3180 nt):
ATGTCAGGTGTGATGGTCGGCTCCCACGCGGACATGGCGCCGGCCTCTACTGCGGAGGGGGCCGGGGAGA
AGCCAGGCCCTGCGGCCCCTGCCCCGGCGGCCCAGTACGAATGTGGGGAGTGTGGCAAGTCATTCCGGTG
GTCGTCCCGGCTCCTGCACCACCAGCGCACGCACACAGGCGAGCGGCCCTACAAGTGCCCAGACTGCCCC
AAGGCTTTCAAAGGCTCCTCGGCCCTGCTCTACCACCAGCGAGGCCACACGGGCGAGCGGCCCTACCAGT
GCCCCGACTGTCCCAAGGCCTTCAAGCGCTCCTCTCTGCTGCAGATCCACCGTAGCGTGCACACCGGCCT
GCGGGCCTTCATCTGCGGCCAGTGCGGCCTGGCCTTCAAGTGGTCGTCCCACTACCAGTACCACTTAAGG
CAGCACACAGGCGAGCGCCCCTACCCGTGCCCGGACTGCCCCAAGGCCTTCAAGAACTCGTCCAGCCTGC
GGCGCCACCGCCACGTGCACACCGGCGAGCGGCCCTACACCTGTGGAGTCTGCGGGAAGAGCTTCACGCA
GAGCACCAACCTGCGGCAGCACCAGCGCGTGCACACGGGCGAGCGGCCCTTCCGCTGCCCGCTCTGCCCC
AAGACCTTCACCCACTCCTCCAACCTGCTGCTGCACCAGCGCACGCACGGCGCCGCCCCCGCCCCGGGTA
CCGCCTCCGCGGCCCCGCCCCCCCAGTCCCGGGAGCCCGGCAAGGTCTTCGTGTGCGACGCCTACCTGCA
GCGGCACCTCCAGCCCCACAGCCCGCCCGCGCCTCCCGCCCCGCCGCCCCCGCCCCCGCCCGTGGTGCCT
GAGCTCTTTTTGGCGGCGGCGGAGACCACGGTGGAGCTGGTGTACCGCTGCGATGGCTGCGAGCAGGGAT
TCAGCAGCGAGGAGCTGCTCCTGGAGCACCAGCCGTGCCCCGGGCCCGATGCGGCGCCCCAGCCCCAGGA
GGCACCCGCCGAGGCGCCCAAGGCCGACCAGCCACCGTCCCCTCTGCCGCAGCCCCCTCCTCCCGCCGCC
GCCCCCGCGCCTGGCTTTGCCTGTCTGCCCTGCGGCAAGTCCTTCCGGACGGTGGCTGGGCTCTCCCGCC
ACCAGCACAGCCACGGGGCTGCCGGCGGGCAAGCGTTCCGCTGCGGCAGCTGCGACGGCTCCTTCCCGCA
GCTGGCCAGCCTCCTGGCGCATCAGCAGTGCCACGTGGAAGAGGCCGCGGCCGGGCGCCCGCCCCCGCAG
GCTGAGGCTGCGGAGGTGACCTGCCCCCAGGAACCGCTGGCGCCTGCCGCCCCCGTCCCGCCGCCACCCC
CGTCCGCCCCCGCTTCTGCGGAGCGGCCCTACAAATGTGCCGAGTGCGGCAAGTCCTTCAAGGGCTCCTC
CGGGCTGCGCTACCACCTGCGGGACCACACGGGCGAGCGGCCCTACCAGTGTGGCGAGTGCGGCAAGGCC
TTCAAGCGCTCCTCCCTGCTGGCCATCCACCAGCGGGTGCACACGGGCCTGCGGGCCTTCACCTGTGGCC
AGTGCGGCCTCACCTTCAAGTGGTCGTCCCACTACCAGTACCACCTGCGGCTGCACTCTGGCGAGCGGCC
CTACGCCTGCGGGGAGTGTGGCAAGGCCTTCCGCAACACGTCGTGCCTGCGTCGCCACCGCCACGTGCAC
ACTGGCGAGAGGCCCCACGCCTGCGGTGTCTGCGGCAAGAGCTTCGCGCAGACCTCCAACCTGCGGCAGC
ACCAGCGCGTGCACACGGGCGAGCGGCCCTTCCGCTGCCCGCTCTGCCCCAAGACCTTCACCCACTCCTC
CAACCTGCTGCTGCACCAGCGCACGCACTCGGCGGAGCGCCCCTTCACCTGCCCCATCTGCGGTCGCGGC
TTCGTTATGGCCGCCTATCTGCAGCGGCACCTGAGGACGCACGCCCCGGCCAACACGCCTCCCAGCACCA
CAGCCCCTGCCGCCGGCCCCCAGCCCCCTGCTCCACTGGCTGCTGCGCGGGCCCCGCCAGCCACCCAAGA
TGTCCACGTCCTGCCCCACCTCCAGGCCACGCTCTCCCTCGAGGTGGCGGGGGGCACGGCCCAGGCCCCG
AGCTTGGGGCCAGCAGCGCCCAACTCTCAGACGTTCCTCCTGGTGCAAACTGCCCAGGGCCTCCAGCTGA
TCCCCAGCAGCGTGCAGCCCCCTACACCTCCGCCCCCTCCCGCACCTCCCAAGCTCATCCTGCTGCCCTC
CTCCAGTGCTGGGGCTGGGGGCGGCCGTGCAAGGCAGGGCCCGCGGGCAGTGGGGAAAGCGGGCCAGGGG
GCGGGAGTGGTCTGGCTGCCAGGCCCTGGGGGTCTAGGGGTGCAGGGAGCGGCCAGCGCTGGGGCCAGCG
GGACAGGGCAGAGCCTCATCGTTCTGCAGAATGTGGGGGGTGGGGAGGCAGGGCCACAGGAAATGAGTGG
GGTGCAGCTCCAGCCCCTCCGACCAGCCCCAGAAGTAACCACGGTCCAGCTCCAGCCAGCGCAGGAGGTG
ACCACAGTCCAGCTCCAGCCAGCACAGGAAGTAACCACGGTCCAGCTCCAGCCAGCACAGGAGGTGACCA
CGGTCCAGCTCCAGCCCGTGGCCGGCCAGCTCTCCAATTCCAGTGGGGGAGCTGTGGCTACTGAGGCACC
CAACCTGCTGGTTGTTCAGAGCGGGGCAGCTGAGGAGTTGCTCACTGGCCCGGGCCCCGGGGAGGCGGGG
GATGGCGAGGCCAGCACTGGTGTGGTCCAGGATGTCCTCTTTGAGACACTCCAGACGGACGAGGGCTTGC
AGAGCGTGCTGGTGCTGAGCGGGGCCGATGGCGAACAGACTCGACTCTGCGTACAGGAGGTAGAAACACT
TCCTCCTGGGCTGACGGAGCCGCCTGCCACCGGCCCACCCGGACAGAAACTCCTCATCATCCGCAGCGCC
CCAGCCACTGAGCTGCTGGACAGCAGCAACACTGGAGGAGGCACCGCCACGCTGCAGCTCCTGGCCCCAC
CGCCGTCAGGCCCAGCCTCGGGCCCCGCGGGGCTCCCCGGGGCTCCAGCCTCCCAGATGGTGCAAGTGGT
CCCCGCAGGAGCTGGGCCTGGTGTTATGACCCCTCAGGGCCTGCCCTCCATCCAGATTGTCCAGACTCTA
CCCGCAGTCCAGCTGGTGCACACGTTTTGA

Translation (1059 aa):
MSGVMVGSHADMAPASTAEGAGEKPGPAAPAPAAQYECGECGKSFRWSSRLLHHQRTHTGERPYKCPDCP
KAFKGSSALLYHQRGHTGERPYQCPDCPKAFKRSSLLQIHRSVHTGLRAFICGQCGLAFKWSSHYQYHLR
QHTGERPYPCPDCPKAFKNSSSLRRHRHVHTGERPYTCGVCGKSFTQSTNLRQHQRVHTGERPFRCPLCP
KTFTHSSNLLLHQRTHGAAPAPGTASAAPPPQSREPGKVFVCDAYLQRHLQPHSPPAPPAPPPPPPPVVP
ELFLAAAETTVELVYRCDGCEQGFSSEELLLEHQPCPGPDAAPQPQEAPAEAPKADQPPSPLPQPPPPAA
APAPGFACLPCGKSFRTVAGLSRHQHSHGAAGGQAFRCGSCDGSFPQLASLLAHQQCHVEEAAAGRPPPQ
AEAAEVTCPQEPLAPAAPVPPPPPSAPASAERPYKCAECGKSFKGSSGLRYHLRDHTGERPYQCGECGKA
FKRSSLLAIHQRVHTGLRAFTCGQCGLTFKWSSHYQYHLRLHSGERPYACGECGKAFRNTSCLRRHRHVH
TGERPHACGVCGKSFAQTSNLRQHQRVHTGERPFRCPLCPKTFTHSSNLLLHQRTHSAERPFTCPICGRG
FVMAAYLQRHLRTHAPANTPPSTTAPAAGPQPPAPLAAARAPPATQDVHVLPHLQATLSLEVAGGTAQAP
SLGPAAPNSQTFLLVQTAQGLQLIPSSVQPPTPPPPPAPPKLILLPSSSAGAGGGRARQGPRAVGKAGQG
AGVVWLPGPGGLGVQGAASAGASGTGQSLIVLQNVGGGEAGPQEMSGVQLQPLRPAPEVTTVQLQPAQEV
TTVQLQPAQEVTTVQLQPAQEVTTVQLQPVAGQLSNSSGGAVATEAPNLLVVQSGAAEELLTGPGPGEAG
DGEASTGVVQDVLFETLQTDEGLQSVLVLSGADGEQTRLCVQEVETLPPGLTEPPATGPPGQKLLIIRSA
PATELLDSSNTGGGTATLQLLAPPPSGPASGPAGLPGAPASQMVQVVPAGAGPGVMTPQGLPSIQIVQTL
PAVQLVHTF


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 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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