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Report for CCDS33304.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33304.1 Public Homo sapiens 2 CCDC148 24 110 108 CCDS HistoryNCBI Gene:130940Re-query CCDS DB by CCDS ID:33304.1Re-query CCDS DB by GeneID:130940See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33304.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000283233.10 ENSP00000283233.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000283233.10Link to Ensembl Protein Viewer:ENSP00000283233.5Re-query CCDS DB by Nucleotide ID:ENST00000283233Re-query CCDS DB by Protein ID:ENSP00000283233
Original member Current member NCBI NM_138803.4 NP_620158.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138803.4Link to Protein Sequence:NP_620158.3Re-query CCDS DB by Nucleotide ID:NM_138803Re-query CCDS DB by Protein ID:NP_620158Link to BLAST:NP_620158.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_620158.3 591 Q8NFR7-1 591 100% 0 0

Chromosomal Locations for CCDS 33304.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 158172113 158172259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158176521 158176661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158178879 158178996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158220595 158220713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158250772 158250912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158309433 158309639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158313756 158313894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158338726 158338907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158338990 158339085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158340242 158340393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158340598 158340680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158345215 158345318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158358449 158358570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158456415 158456439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1776 nt):
ATGTGTGCAGCTTCTGCTTCTCCAGATAATCTGGTATTCCATATGAAAAATGAGATGAGAAACATCAAGT
ACAAACCAGTAGACTATCAACAATTGCGTGCATTAACTGAAGCAAAGAAATTGGCTTCTGCCTCTGCAAA
GCTAAAGATCAGAAAAGCAATGTTGACTTCAAAGTTATCCAAAGAACAAACACTAATAAAACAACACAAG
CAAGTGTGGTGGCAGGAATACCAGAGGCTGAATGAAGTCAGATGTAAAATGGAATCTGAAATAAAATCCC
TTCTCAATGAAGAGAACATTGGAAATGAATGTCTTTGTGACCTTACAAATTTTGAGCAAGAGCTATCAGA
ACAACAGTGCACATATCTTAAAAATGTAATAAATCCTATTCAGCAGCTGAGAGCAGATCTAAAATACAGA
CAGCATCACACTTTGCAGCATTCACACCCACATATTGAGTTTAACTCCATGAAAGTATTGGAAGAGGTTG
ACTTTGTGAAGAAACAATTGAAAACTGTCTTTGAAAGACTTAGGCTGGAGCAACAGAGAATAGAAAATGA
TCTTTCAGACTGGAGTATAAAGATTCTAGATCATTCTTTGGAAGAAAAGACTAACCCGCTTAGTGAACTG
CCCATTGAATTAGAAAGTTTGGAATGCCCATACCCTGATTTGAAATCTTCAATTCTCAGTGAGTTCTATA
AGTTTACACAGAAATATCAGAAGAAGCTTCAAGACTTTAATCTGCAGTTGGAAGACATATACAGAAACTG
TCAACTAAGTGAAGAAGACCACTGGATTTACCAGGCTATTTTGGATCAGTACCCTGGAGATCTCTTTGGA
AGAAGGACTCTGTATCTGGACATGTTACAAAGATATTTTCCTCACAAATCTAGGCATGATTTGGTTGAAC
ACGAGAAATATTGTGACCAATATCGCTTTGCTATAGAGCAGCAAAATATCCTGATATCAAATTGGAATAA
AAATAAGAAAGACTTTATACAGAAGGCTGTGCTGACACTCACTGAGGCTTGTGCAACACATGAAATGGAG
AGCATGTTGGCTAAGGACAAGAAAAAGCAACAGGAATTGTGTGCTGATCTGAAAGCCAAGGTTCGTCAAT
GGCGAGCCCACCAAGAAGAGGTAGCAAGACTGGAAATGGAAATTTCTGCCAGAAGAAGAGAAAAGGAAGA
GGAGAAAGAGAAACTGTGGAAGAAGAAGGAATTGTTGCAAAGAGCAGAGAAGAAAAAAAAAATAAAAAAA
TACTGGGCCAAGAAAAAACAGAAGTGGCAAGAAATGGAAATGAGAGATCTTCAGCGTCTAGAAGAACTGA
AGAAATTAATCGCTGAACAGTCACTAAAAGACAGAGAAAGGGTTAAATATAGACAAGAATTATTGGAAAG
GCGTTTGATGGAGAAAAAGGAAGTGGCCCTTCAAGAAGCTCATGAAGACAAAGAGAGAGCACGGCGGCTA
GAAGCCCTTAGGAAACAGGTTGCTGTTGTTGCTCAATTTGATCCTGTTAGAATGATGTCAGATACAATGG
CATCAAAAGCTAGAATGGGCATTGAAATTGAAGAAGAATTTATTCTTCAAAAGCCACTCTTCACATTGAA
TACATACAATGAACAGCAGATAATTTCTGACCCTAGACTTCGCTTCGAGTTAGCACTTCGAGAAGCTGGA
CTTCATAGAACACTTTATGCTAAAGAGATATTACCAAAAATTAGTCCTCAAAAACCTCCAAGAAAGGACA
TGGAGTCTACTGTATTTAAAATATAG

Translation (591 aa):
MCAASASPDNLVFHMKNEMRNIKYKPVDYQQLRALTEAKKLASASAKLKIRKAMLTSKLSKEQTLIKQHK
QVWWQEYQRLNEVRCKMESEIKSLLNEENIGNECLCDLTNFEQELSEQQCTYLKNVINPIQQLRADLKYR
QHHTLQHSHPHIEFNSMKVLEEVDFVKKQLKTVFERLRLEQQRIENDLSDWSIKILDHSLEEKTNPLSEL
PIELESLECPYPDLKSSILSEFYKFTQKYQKKLQDFNLQLEDIYRNCQLSEEDHWIYQAILDQYPGDLFG
RRTLYLDMLQRYFPHKSRHDLVEHEKYCDQYRFAIEQQNILISNWNKNKKDFIQKAVLTLTEACATHEME
SMLAKDKKKQQELCADLKAKVRQWRAHQEEVARLEMEISARRREKEEEKEKLWKKKELLQRAEKKKKIKK
YWAKKKQKWQEMEMRDLQRLEELKKLIAEQSLKDRERVKYRQELLERRLMEKKEVALQEAHEDKERARRL
EALRKQVAVVAQFDPVRMMSDTMASKARMGIEIEEEFILQKPLFTLNTYNEQQIISDPRLRFELALREAG
LHRTLYAKEILPKISPQKPPRKDMESTVFKI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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