NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS33338.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33338.1 Public Homo sapiens 2 SESTD1 24 110 108 CCDS HistoryNCBI Gene:91404Re-query CCDS DB by CCDS ID:33338.1Re-query CCDS DB by GeneID:91404See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33338.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000428443.8 ENSP00000415332.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000428443.8Link to Ensembl Protein Viewer:ENSP00000415332.2Re-query CCDS DB by Nucleotide ID:ENST00000428443Re-query CCDS DB by Protein ID:ENSP00000415332
Original member Current member NCBI NM_178123.5 NP_835224.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_178123.5Link to Protein Sequence:NP_835224.3Re-query CCDS DB by Nucleotide ID:NM_178123Re-query CCDS DB by Protein ID:NP_835224Link to BLAST:NP_835224.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_835224.3 696 Q86VW0 696 100% 0 0

Chromosomal Locations for CCDS 33338.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 179109899 179110028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179112724 179112845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179115065 179115256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179116668 179116790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179117532 179117613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179121770 179121929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179123715 179123829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179124364 179124558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179132304 179132426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179143592 179143803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179146402 179146457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179149297 179149394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179151278 179151391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179172120 179172233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179176448 179176538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179183080 179183188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179191787 179191841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2091 nt):
ATGGAGGCCTCAGTAATATTACCCATTCTGAAGAAAAAACTAGCCTTCCTTTCAGGAGGAAAAGACAGAC
GGAGTGGCCTCATTTTGACAATTCCATTATGCCTCGAACAGACAAATATGGATGAGCTGAGTGTCACCTT
AGACTACCTACTCAGCATTCCAAGTGAGAAGTGTAAGGCTAGAGGATTTACCGTGATTGTGGATGGCAGA
AAATCACAGTGGAATGTGGTGAAAACAGTAGTCGTAATGCTACAGAATGTTGTTCCAGCTGAGGTGTCCC
TTGTTTGTGTGGTAAAGCCAGATGAATTCTGGGATAAGAAAGTAACGCATTTTTGTTTTTGGAAGGAGAA
GGATAGACTTGGCTTTGAGGTTATTTTAGTGTCCGCCAACAAATTGACTCGTTATATAGAACCATGCCAA
TTAACAGAAGATTTTGGTGGGAGTCTCACCTATGATCACATGGACTGGTTAAATAAGAGGCTGGTTTTTG
AGAAGTTTACAAAGGAATCTACATCATTATTAGATGAACTTGCTTTGATTAACAATGGAAGTGATAAAGG
AAATCAGCAAGAGAAAGAAAGGTCTGTGGATTTAAACTTTCTTCCATCGGTTGATCCTGAAACAGTTCTT
CAGACAGGGCATGAATTGTTGTCCGAATTACAGCAGCGTCGATTTAATGGCTCAGACGGAGGGGTTTCAT
GGTCTCCTATGGATGATGAACTTCTTGCACAGCCACAGGTTATGAAATTATTAGATTCACTCCGAGAGCA
ATATACCCGCTACCAGGAAGTTTGTAGGCAACGTAGCAAGCGCACACAGTTAGAAGAGATTCAACAGAAG
GTAATGCAGGTGGTGAACTGGCTAGAAGGGCCTGGATCAGAACAACTAAGAGCCCAGTGGGGCATTGGAG
ACTCCATTAGGGCCTCCCAGGCCCTACAGCAGAAACACGAAGAGATTGAGAGCCAGCACAGTGAATGGTT
TGCAGTGTATGTGGAACTTAATCAGCAAATTGCAGCACTCTTGAATGCTGGCGATGAGGAAGATCTTGTG
GAACTAAAGTCACTGCAGCAACAACTTAGTGATGTTTGTTATCGACAGGCCAGTCAGCTGGAATTTAGGC
AAAATCTCTTACAAGCAGCTCTTGAATTTCATGGTGTTGCCCAAGATTTGTCTCAGCAGTTGGATGGCTT
ATTAGGGATGTTGTGCGTAGATGTAGCACCAGCTGATGGAGCATCGATTCAGCAAACTTTAAAACTGCTT
GAAGAGAAGCTGAAAAGTGTTGATGTGGGATTGCAAGGTTTGCGTGAAAAAGGTCAAGGTCTCCTGGATC
AGATCTCCAATCAGGCATCCTGGGCCTATGGAAAGGATGTAACCATTGAAAATAAAGAAAATGTGGACCA
CATACAAGGAGTGATGGAAGATATGCAGCTTAGAAAACAAAGATGTGAAGACATGGTAGATGTGCGAAGG
TTAAAGATGCTTCAGATGGTGCAGTTGTTTAAATGTGAAGAAGATGCTGCCCAGGCAGTAGAATGGCTAA
GTGAACTTCTGGATGCTCTGCTTAAGACTCACATCAGATTGGGCGATGATGCTCAAGAAACGAAAGTTTT
GCTGGAAAAGCATAGAAAATTTGTTGATGTTGCACAGAGCACTTATGACTATGGCAGGCAGTTGCTACAG
GCCACAGTTGTGTTATGCCAATCTTTGCGCTGCACTTCTCGGTCATCTGGGGATACACTTCCTCGACTGA
ACAGAGTATGGAAACAATTTACAATAGCATCTGAAGAGAGAGTACATAGATTGGAAATGGCTATTGCATT
TCACTCAAATGCTGAAAAGATTTTGCAGGACTGTCCAGAAGAGCCTGAAGCTATTAATGATGAGGAGCAA
TTTGATGAAATTGAAGCAGTTGGGAAATCACTTTTGGATAGATTAACTGTTCCAGTAGTTTATCCTGATG
GAACCGAACAATATTTTGGGAGTCCAAGTGACATGGCTTCTACTGCAGAAAACATCAGAGACAGGATGAA
ACTAGTTAATCTCAAAAGGCAGCAGCTGAGACATCCTGAAATGGTGACCACAGAGAGCTAA

Translation (696 aa):
MEASVILPILKKKLAFLSGGKDRRSGLILTIPLCLEQTNMDELSVTLDYLLSIPSEKCKARGFTVIVDGR
KSQWNVVKTVVVMLQNVVPAEVSLVCVVKPDEFWDKKVTHFCFWKEKDRLGFEVILVSANKLTRYIEPCQ
LTEDFGGSLTYDHMDWLNKRLVFEKFTKESTSLLDELALINNGSDKGNQQEKERSVDLNFLPSVDPETVL
QTGHELLSELQQRRFNGSDGGVSWSPMDDELLAQPQVMKLLDSLREQYTRYQEVCRQRSKRTQLEEIQQK
VMQVVNWLEGPGSEQLRAQWGIGDSIRASQALQQKHEEIESQHSEWFAVYVELNQQIAALLNAGDEEDLV
ELKSLQQQLSDVCYRQASQLEFRQNLLQAALEFHGVAQDLSQQLDGLLGMLCVDVAPADGASIQQTLKLL
EEKLKSVDVGLQGLREKGQGLLDQISNQASWAYGKDVTIENKENVDHIQGVMEDMQLRKQRCEDMVDVRR
LKMLQMVQLFKCEEDAAQAVEWLSELLDALLKTHIRLGDDAQETKVLLEKHRKFVDVAQSTYDYGRQLLQ
ATVVLCQSLRCTSRSSGDTLPRLNRVWKQFTIASEERVHRLEMAIAFHSNAEKILQDCPEEPEAINDEEQ
FDEIEAVGKSLLDRLTVPVVYPDGTEQYFGSPSDMASTAENIRDRMKLVNLKRQQLRHPEMVTTES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH