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Report for CCDS33401.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33401.1 Public Homo sapiens 2 GIGYF2 24 110 108 CCDS HistoryNCBI Gene:26058Re-query CCDS DB by CCDS ID:33401.1Re-query CCDS DB by GeneID:26058See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33401.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373563.9 ENSP00000362664.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000373563.9Link to Ensembl Protein Viewer:ENSP00000362664.5Re-query CCDS DB by Nucleotide ID:ENST00000373563Re-query CCDS DB by Protein ID:ENSP00000362664
Original member Current member EBI ENST00000409547.5 ENSP00000386537.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409547.5Link to Ensembl Protein Viewer:ENSP00000386537.1Re-query CCDS DB by Nucleotide ID:ENST00000409547Re-query CCDS DB by Protein ID:ENSP00000386537
Original member Current member NCBI NM_001103146.3 NP_001096616.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001103146.3Link to Protein Sequence:NP_001096616.1Re-query CCDS DB by Nucleotide ID:NM_001103146Re-query CCDS DB by Protein ID:NP_001096616Link to BLAST:NP_001096616.1
Original member Current member NCBI NM_015575.4 NP_056390.2 Accepted alive Link to Nucleotide Sequence:NM_015575.4Link to Protein Sequence:NP_056390.2Re-query CCDS DB by Nucleotide ID:NM_015575Re-query CCDS DB by Protein ID:NP_056390Link to BLAST:NP_056390.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001096616.1 1299 Q6Y7W6-1 1299 100% 0 0
NP_056390.2 1299 Q6Y7W6-1 1299 100% 0 0

Chromosomal Locations for CCDS 33401.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 232735198 232735238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 232747615 232747744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 232748987 232749082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 232756223 232756334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 232760480 232760591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 232761396 232761436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 232787150 232787329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 232790698 232790915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 232791008 232791170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 232791258 232791446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 232794748 232794944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 232796062 232796221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 232806491 232806657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 232809720 232809811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 232811244 232811351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 232812391 232812491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 232815637 232815737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 232816871 232817032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 232819827 232819985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 232832857 232833093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 232839849 232839971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 232844046 232844255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 232844369 232844574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 232845732 232845886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 232847348 232847571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 232850262 232850409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 232856793 232856860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3900 nt):
ATGGCAGCGGAAACGCAGACACTGAACTTTGGGCCTGAATGGCTCCGAGCTCTGTCCAGTGGTGGGAGTA
TTACATCCCCTCCTCTTTCTCCAGCATTGCCGAAGTATAAATTAGCAGATTATCGTTACGGCAGAGAAGA
AATGTTAGCACTTTTCCTTAAAGACAACAAGATACCTTCAGACCTTCTGGATAAAGAATTTCTGCCTATC
CTCCAGGAGGAACCCCTTCCACCATTGGCTCTGGTACCCTTTACAGAAGAAGAACAGAGAAACTTTTCCA
TGTCTGTAAATAGTGCTGCTGTCCTGCGATTGACAGGACGAGGAGGAGGAGGAACAGTGGTGGGGGCTCC
TAGAGGTCGAAGTTCTTCAAGAGGGCGAGGCAGAGGCAGAGGTGAATGTGGTTTCTACCAAAGAAGTTTT
GATGAAGTAGAGGGTGTTTTTGGTCGAGGAGGTGGCAGAGAAATGCATAGATCGCAGAGCTGGGAGGAAA
GGGGTGACAGACGTTTTGAAAAACCAGGACGAAAAGATGTAGGGAGACCAAATTTTGAGGAAGGTGGACC
AACATCAGTAGGGAGAAAGCATGAATTTATACGCTCAGAAAGTGAAAATTGGCGCATCTTTAGAGAGGAA
CAAAATGGAGAAGATGAAGATGGAGGTTGGCGACTAGCTGGATCAAGGAGGGATGGAGAGAGGTGGCGAC
CTCACAGTCCTGATGGCCCTCGTTCTGCAGGCTGGCGGGAACACATGGAACGACGTCGGAGGTTTGAGTT
TGATTTTCGAGATAGAGATGATGAACGGGGTTACCGAAGGGTTCGCTCTGGCAGTGGGAGCATAGATGAT
GACAGGGATAGCTTGCCCGAATGGTGCTTAGAGGATGCTGAAGAAGAAATGGGTACATTTGACTCATCTG
GAGCATTCCTTTCTCTAAAAAAAGTACAGAAAGAGCCTATTCCAGAAGAGCAGGAGATGGACTTCCGGCC
TGTGGACGAAGGGGAGGAGTGCTCTGACTCTGAGGGTAGCCATAATGAAGAGGCCAAAGAACCCGATAAG
ACAAATAAGAAAGAAGGAGAGAAAACAGATAGAGTAGGAGTTGAAGCTAGTGAGGAAACTCCCCAGACCT
CATCATCATCTGCTAGACCAGGTACTCCTTCAGACCATCAGTCTCAGGAAGCATCACAGTTTGAGAGGAA
AGATGAACCAAAAACTGAGCAAACGGAAAAAGCTGAAGAGGAGACTCGGATGGAAAATAGTCTACCAGCC
AAAGTGCCCAGCAGAGGGGATGAAATGGTTGCTGATGTCCAGCAGCCCCTGTCGCAGATTCCTTCAGATA
CAGCCTCTCCTCTTCTCATACTTCCACCTCCTGTTCCCAATCCTAGTCCTACTCTCCGGCCAGTTGAAAC
ACCAGTTGTAGGTGCTCCTGGTATGGGCAGTGTTTCCACAGAACCTGATGATGAAGAAGGTCTCAAACAT
TTGGAGCAGCAAGCTGAGAAAATGGTGGCTTATCTCCAAGACAGTGCACTAGATGATGAAAGATTGGCAT
CAAAACTGCAAGAGCACAGAGCTAAAGGAGTGTCGATTCCATTGATGCATGAAGCAATGCAGAAGTGGTA
TTACAAAGATCCTCAGGGAGAAATTCAAGGTCCCTTCAATAATCAGGAGATGGCAGAATGGTTTCAGGCG
GGCTATTTTACTATGTCTTTATTGGTGAAGAGAGCGTGTGATGAAAGCTTCCAACCTCTTGGCGATATCA
TGAAAATGTGGGGAAGGGTTCCCTTTTCTCCAGGTCCAGCTCCCCCTCCTCATATGGGAGAGCTGGACCA
GGAACGACTGACCAGGCAGCAAGAACTCACAGCCTTATACCAGATGCAGCACCTGCAGTACCAGCAGTTT
TTAATACAACAACAATATGCACAGGTTTTGGCCCAACAGCAGAAAGCAGCACTGTCTTCCCAGCAGCAGC
AGCAGTTGGCACTTCTTCTTCAACAGTTTCAGACCTTGAAGATGAGAATATCTGATCAGAACATCATTCC
CTCAGTAACTAGGTCTGTGTCCGTGCCAGATACTGGCTCTATCTGGGAGCTTCAGCCAACAGCTTCACAG
CCTACAGTTTGGGAAGGTGGTAGTGTATGGGATCTTCCTCTGGACACCACGACACCAGGCCCTGCCCTGG
AACAGCTTCAGCAGCTAGAGAAGGCCAAAGCTGCAAAGCTAGAGCAAGAGAGAAGAGAGGCAGAAATGAG
GGCAAAACGGGAAGAGGAAGAGCGAAAGAGGCAGGAAGAACTCCGAAGACAACAGGAGGAAATTCTTCGG
CGACAGCAGGAAGAAGAAAGGAAAAGGCGAGAGGAAGAAGAACTTGCCCGAAGGAAACAGGAAGAGGCTC
TGCGTCGCCAGCGGGAGCAAGAAATTGCATTAAGGCGACAGCGAGAAGAGGAAGAAAGACAGCAGCAAGA
AGAAGCTCTTAGAAGACTGGAAGAGAGGAGAAGAGAAGAGGAAGAAAGGCGGAAGCAGGAAGAATTGTTA
CGCAAACAGGAAGAGGAGGCTGCAAAATGGGCCCGGGAAGAAGAAGAAGCCCAGCGTCGATTAGAGGAGA
ACCGGCTGCGGATGGAAGAGGAGGCAGCCAGACTCCGGCATGAGGAAGAAGAACGGAAGAGAAAGGAGCT
GGAGGTCCAGCGGCAGAAGGAGTTAATGCGCCAGAGGCAGCAGCAGCAAGAGGCTCTCCGGAGGTTGCAG
CAGCAGCAGCAGCAACAACAGCTGGCGCAGATGAAGCTTCCTTCTTCTTCAACGTGGGGCCAGCAGTCCA
ATACAACAGCATGTCAGTCCCAGGCCACGCTGTCGTTGGCTGAAATCCAAAAACTAGAGGAAGAACGAGA
ACGGCAGCTTCGAGAAGAGCAAAGGCGCCAGCAGAGGGAGTTGATGAAAGCTCTTCAGCAGCAGCAGCAA
CAGCAACAGCAGAAACTCTCAGGTTGGGGGAATGTCAGCAAACCTTCAGGTACCACGAAATCTCTTCTGG
AGATCCAGCAGGAAGAGGCCAGGCAAATGCAAAAGCAGCAGCAGCAGCAGCAGCAACACCAGCAACCAAA
CAGAGCTCGTAACAATACGCATTCCAACCTGCACACCAGCATTGGGAATTCTGTTTGGGGCTCTATAAAT
ACTGGTCCTCCTAACCAGTGGGCATCTGACCTAGTCAGTAGTATTTGGAGTAATGCTGACACTAAAAACT
CCAACATGGGATTCTGGGATGATGCAGTGAAAGAGGTGGGACCTAGGAATTCAACAAATAAAAATAAAAA
CAACGCCAGTCTCAGTAAATCTGTAGGTGTGTCTAACCGGCAGAATAAGAAAGTAGAAGAAGAAGAAAAG
TTGCTGAAGCTCTTTCAGGGAGTAAATAAAGCCCAAGATGGATTTACGCAGTGGTGTGAACAGATGCTTC
ATGCCCTTAATACGGCAAATAACTTGGATGTTCCCACATTTGTTTCTTTCCTGAAAGAAGTAGAATCTCC
TTATGAGGTCCATGATTATATCAGGGCCTATTTAGGAGATACTTCTGAGGCCAAGGAGTTTGCCAAGCAG
TTCCTTGAGCGCCGTGCCAAACAGAAAGCCAACCAGCAGCGTCAGCAGCAGCAGCTGCCACAGCAGCAGC
AGCAGCAGCCGCCACAGCAGCCGCCACAGCAGCCACAACAGCAGGACTCTGTGTGGGGGATGAACCACAG
TACACTCCATTCAGTATTTCAGACCAATCAAAGCAACAACCAACAATCCAATTTTGAGGCTGTGCAGAGT
GGCAAGAAGAAGAAAAAGCAGAAGATGGTCCGAGCAGATCCCAGTTTATTAGGATTTTCAGTCAATGCAT
CATCGGAGCGACTCAACATGGGTGAAATCGAGACGTTGGATGACTACTGA

Translation (1299 aa):
MAAETQTLNFGPEWLRALSSGGSITSPPLSPALPKYKLADYRYGREEMLALFLKDNKIPSDLLDKEFLPI
LQEEPLPPLALVPFTEEEQRNFSMSVNSAAVLRLTGRGGGGTVVGAPRGRSSSRGRGRGRGECGFYQRSF
DEVEGVFGRGGGREMHRSQSWEERGDRRFEKPGRKDVGRPNFEEGGPTSVGRKHEFIRSESENWRIFREE
QNGEDEDGGWRLAGSRRDGERWRPHSPDGPRSAGWREHMERRRRFEFDFRDRDDERGYRRVRSGSGSIDD
DRDSLPEWCLEDAEEEMGTFDSSGAFLSLKKVQKEPIPEEQEMDFRPVDEGEECSDSEGSHNEEAKEPDK
TNKKEGEKTDRVGVEASEETPQTSSSSARPGTPSDHQSQEASQFERKDEPKTEQTEKAEEETRMENSLPA
KVPSRGDEMVADVQQPLSQIPSDTASPLLILPPPVPNPSPTLRPVETPVVGAPGMGSVSTEPDDEEGLKH
LEQQAEKMVAYLQDSALDDERLASKLQEHRAKGVSIPLMHEAMQKWYYKDPQGEIQGPFNNQEMAEWFQA
GYFTMSLLVKRACDESFQPLGDIMKMWGRVPFSPGPAPPPHMGELDQERLTRQQELTALYQMQHLQYQQF
LIQQQYAQVLAQQQKAALSSQQQQQLALLLQQFQTLKMRISDQNIIPSVTRSVSVPDTGSIWELQPTASQ
PTVWEGGSVWDLPLDTTTPGPALEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQEELRRQQEEILR
RQQEEERKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEEALRRLEERRREEEERRKQEELL
RKQEEEAAKWAREEEEAQRRLEENRLRMEEEAARLRHEEEERKRKELEVQRQKELMRQRQQQQEALRRLQ
QQQQQQQLAQMKLPSSSTWGQQSNTTACQSQATLSLAEIQKLEEERERQLREEQRRQQRELMKALQQQQQ
QQQQKLSGWGNVSKPSGTTKSLLEIQQEEARQMQKQQQQQQQHQQPNRARNNTHSNLHTSIGNSVWGSIN
TGPPNQWASDLVSSIWSNADTKNSNMGFWDDAVKEVGPRNSTNKNKNNASLSKSVGVSNRQNKKVEEEEK
LLKLFQGVNKAQDGFTQWCEQMLHALNTANNLDVPTFVSFLKEVESPYEVHDYIRAYLGDTSEAKEFAKQ
FLERRAKQKANQQRQQQQLPQQQQQQPPQQPPQQPQQQDSVWGMNHSTLHSVFQTNQSNNQQSNFEAVQS
GKKKKKQKMVRADPSLLGFSVNASSERLNMGEIETLDDY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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