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Report for CCDS33525.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33525.1 Public Homo sapiens 21 N6AMT1 24 110 108 CCDS HistoryNCBI Gene:29104Re-query CCDS DB by CCDS ID:33525.1Re-query CCDS DB by GeneID:29104See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33525.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000351429.7 ENSP00000286764.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000351429.7Link to Ensembl Protein Viewer:ENSP00000286764.4Re-query CCDS DB by Nucleotide ID:ENST00000351429Re-query CCDS DB by Protein ID:ENSP00000286764
Original member Current member NCBI NM_182749.5 NP_877426.4 Accepted alive Link to Nucleotide Sequence:NM_182749.5Link to Protein Sequence:NP_877426.4Re-query CCDS DB by Nucleotide ID:NM_182749Re-query CCDS DB by Protein ID:NP_877426Link to BLAST:NP_877426.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_877426.4 186 Q9Y5N5-2 186 100% 0 0

Chromosomal Locations for CCDS 33525.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 28876385 28876491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 28878192 28878333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 28882160 28882250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 28882985 28883071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 28885212 28885345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (561 nt):
ATGGCAGGGGAGAACTTCGCTACGCCGTTCCACGGGCACGTGGGCCGCGGCGCCTTCAGCGACGTGTACG
AGCCCGCGGAGGACACGTTTCTGCTTTTGGACGCGCTGGAGGCAGCGGCTGCCGAACTGGCAGGAGTGGA
AATATGCCTGGAAGTAGGGTCAGGGTCTGGTGTAGTATCTGCATTCCTAGCCTCTATGATAGGCCCTCAG
GCTTTGTACATGTGCACTGATATCAACCCTGAGGCAGCAGCTTGTACCCTAGAGACAGCACGCTGTAACA
AAGTTCACATTCAACCAGTTATTACAGATTTGGTAGGAAGTCACGGAATAGAGGCAGCTTGGGCTGGTGG
CAGAAATGGTCGGGAAGTCATGGACAGGTTTTTTCCCCTGGTTCCAGATCTCCTTTCACCAAGAGGATTA
TTCTATTTAGTTACCATTAAAGAAAACAACCCAGAAGAAATTTTGAAAATAATGAAGACAAAAGGTCTGC
AAGGAACCACTGCACTTTCCAGACAAGCAGGCCAAGAAACTCTTTCAGTCCTCAAGTTCACCAAGTCTTA
G

Translation (186 aa):
MAGENFATPFHGHVGRGAFSDVYEPAEDTFLLLDALEAAAAELAGVEICLEVGSGSGVVSAFLASMIGPQ
ALYMCTDINPEAAACTLETARCNKVHIQPVITDLVGSHGIEAAWAGGRNGREVMDRFFPLVPDLLSPRGL
FYLVTIKENNPEEILKIMKTKGLQGTTALSRQAGQETLSVLKFTKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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