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Report for CCDS34536.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34536.1 Public Homo sapiens 6 TMEM244 24 110 108 CCDS HistoryNCBI Gene:253582Re-query CCDS DB by CCDS ID:34536.1Re-query CCDS DB by GeneID:253582See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34536.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000368143.6 ENSP00000357125.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000368143.6Link to Ensembl Protein Viewer:ENSP00000357125.1Re-query CCDS DB by Nucleotide ID:ENST00000368143Re-query CCDS DB by Protein ID:ENSP00000357125
Original member Current member NCBI NM_001010876.2 NP_001010876.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001010876.2Link to Protein Sequence:NP_001010876.1Re-query CCDS DB by Nucleotide ID:NM_001010876Re-query CCDS DB by Protein ID:NP_001010876Link to BLAST:NP_001010876.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001010876.1 128 Q5VVB8 128 100% 0 0

Chromosomal Locations for CCDS 34536.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 129831319 129831386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 129833460 129833585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 129843530 129843603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 129845767 129845852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 129861156 129861188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (387 nt):
ATGGCTCTCCAGGTCAGAGTTGCTCCAAGCAAGGTTGTTTTGCAGAAGTTTCTTCTATGTGTCATTCTTT
TCTACACTGTGTACTATGTGTCCCTGAGCATGGGCTGCGTGATGTTTGAGGTGCATGAGTTGAATGTCCT
GGCTCCATTTGATTTCAAAACAAATCCCTCATGGCTCAACATAAACTATAAAGTTCTTTTAGTTTCAACA
GAGGTCACCTACTTTGTTTGTGGATTGTTTTTTGTTCCAGTTGTGGAAGAATGGGTTTGGGATTATGCTA
TTTCAGTCACTATTCTTCATGTTGCCATCACTTCAACTGTTATGTTGGAATTCCCCTTGACATCACATTG
GTGGGCTGCTTTAGGTATATCAAAATTGCTTGTTTAG

Translation (128 aa):
MALQVRVAPSKVVLQKFLLCVILFYTVYYVSLSMGCVMFEVHELNVLAPFDFKTNPSWLNINYKVLLVST
EVTYFVCGLFFVPVVEEWVWDYAISVTILHVAITSTVMLEFPLTSHWWAALGISKLLV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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