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Report for CCDS35000.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35000.1 Public Homo sapiens 9 PLAA 24 110 108 CCDS HistoryNCBI Gene:9373Re-query CCDS DB by CCDS ID:35000.1Re-query CCDS DB by GeneID:9373See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35000.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000397292.8 ENSP00000380460.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000397292.8Link to Ensembl Protein Viewer:ENSP00000380460.3Re-query CCDS DB by Nucleotide ID:ENST00000397292Re-query CCDS DB by Protein ID:ENSP00000380460
Original member Current member NCBI NM_001031689.3 NP_001026859.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001031689.3Link to Protein Sequence:NP_001026859.1Re-query CCDS DB by Nucleotide ID:NM_001031689Re-query CCDS DB by Protein ID:NP_001026859Link to BLAST:NP_001026859.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001026859.1 795 Q9Y263 795 100% 0 0

Chromosomal Locations for CCDS 35000.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 26905511 26906076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26907834 26907998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26910338 26910439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26913879 26913947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26917097 26917165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26919310 26919529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26920227 26920384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26923178 26923347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26925825 26925960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26926393 26926560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26928100 26928220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26928308 26928408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26935013 26935206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26946897 26947045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2388 nt):
ATGACGAGCGGCGCAACCAGGTACCGGCTGAGCTGCTCGCTCCGGGGCCACGAGCTGGACGTACGGGGCC
TGGTGTGCTGCGCCTATCCGCCGGGAGCCTTTGTGTCCGTGTCCCGAGACCGCACCACCCGCCTCTGGGC
CCCAGACAGTCCAAACAGGAGCTTTACAGAAATGCACTGTATGAGTGGCCATTCCAATTTTGTATCTTGT
GTATGCATCATACCCTCAAGTGACATCTACCCTCATGGCCTAATTGCCACCGGTGGAAATGACCACAATA
TATGCATTTTCTCACTGGACAGTCCAATGCCACTTTATATTCTAAAAGGCCACAAAAATACTGTTTGTAG
TCTATCATCTGGAAAATTTGGGACATTACTTAGTGGTTCATGGGACACCACTGCTAAAGTCTGGCTGAAT
GACAAGTGCATGATGACCTTGCAGGGTCATACAGCTGCAGTGTGGGCGGTAAAGATCTTACCTGAACAGG
GCTTAATGTTGACTGGATCAGCAGACAAGACTGTTAAACTGTGGAAGGCTGGAAGATGTGAGAGGACTTT
TTCAGGGCATGAAGACTGTGTAAGAGGTTTGGCAATTTTGAGTGAAACAGAATTTCTTTCCTGTGCAAAT
GATGCTAGTATTAGAAGGTGGCAAATCACTGGCGAGTGTCTTGAAGTATATTATGGACATACAAATTATA
TTTATAGCATATCCGTTTTTCCAAATTGTAGAGACTTTGTGACAACAGCAGAGGACAGATCTCTGAGAAT
CTGGAAACATGGGGAATGTGCTCAAACTATCCGACTTCCAGCTCAGTCTATATGGTGCTGCTGTGTGCTC
GACAATGGTGACATTGTGGTTGGTGCGAGTGATGGCATTATTAGAGTGTTTACAGAATCAGAAGATCGAA
CAGCAAGTGCTGAAGAAATCAAGGCTTTTGAAAAAGAACTGTCTCACGCAACCATTGATTCTAAAACTGG
CGATTTAGGGGACATCAATGCTGAGCAGCTTCCTGGGAGGGAACATCTTAATGAACCTGGTACTAGAGAA
GGACAGACTCGTCTAATCAGAGATGGGGAGAAAGTCGAAGCCTATCAGTGGAGTGTTAGTGAAGGGAGGT
GGATAAAAATTGGTGATGTTGTTGGCTCATCTGGTGCTAATCAGCAAACATCTGGAAAAGTTTTATATGA
AGGGAAAGAATTTGATTATGTTTTCTCAATTGATGTCAATGAAGGTGGACCATCATATAAATTGCCATAT
AATACCAGTGATGACCCTTGGTTAACTGCATACAACTTCTTACAGAAGAATGATTTGAATCCTATGTTTC
TGGATCAAGTAGCTAAATTTATTATTGATAACACAAAAGGTCAAATGTTGGGACTTGGGAATCCCAGCTT
TTCAGATCCATTTACAGGTGGTGGTCGGTATGTTCCGGGCTCTTCGGGATCTTCTAACACACTACCCACA
GCAGATCCTTTTACAGGTGCTGGTCGTTATGTACCAGGTTCTGCAAGTATGGGAACTACCATGGCCGGAG
TTGATCCATTTACAGGGAATAGTGCCTACCGATCAGCTGCATCTAAAACAATGAATATTTATTTCCCTAA
AAAAGAGGCTGTCACATTTGACCAAGCAAACCCTACACAAATATTAGGTAAACTGAAGGAACTTAATGGA
ACTGCACCTGAAGAGAAGAAGTTAACTGAGGATGACTTGATACTTCTTGAGAAGATACTGTCTCTAATAT
GTAATAGTTCTTCAGAAAAACCCACAGTCCAGCAACTTCAGATTTTGTGGAAAGCTATTAACTGTCCTGA
AGATATTGTCTTTCCTGCACTTGACATTCTTCGGTTGTCAATTAAACACCCCAGTGTGAATGAGAACTTC
TGCAATGAAAAGGAAGGGGCTCAGTTCAGCAGTCATCTTATCAATCTTCTGAACCCTAAAGGAAAGCCAG
CAAACCAGCTGCTTGCTCTCAGGACTTTTTGCAATTGTTTTGTTGGCCAGGCAGGACAAAAACTCATGAT
GTCCCAGAGGGAATCACTGATGTCCCATGCAATAGAACTGAAATCAGGGAGCAATAAGAACATTCACATT
GCTCTGGCTACATTGGCCCTGAACTATTCTGTTTGTTTTCATAAAGACCATAACATTGAAGGGAAAGCCC
AATGTTTGTCACTAATTAGCACAATCTTGGAAGTAGTACAAGACCTAGAAGCCACTTTTAGACTTCTTGT
GGCTCTTGGAACACTTATCAGTGATGATTCAAATGCTGTACAATTAGCCAAGTCTTTAGGTGTTGATTCT
CAAATAAAAAAGTATTCCTCAGTATCAGAACCAGCTAAAGTAAGTGAATGCTGTAGATTTATCCTAAATT
TGCTGTAG

Translation (795 aa):
MTSGATRYRLSCSLRGHELDVRGLVCCAYPPGAFVSVSRDRTTRLWAPDSPNRSFTEMHCMSGHSNFVSC
VCIIPSSDIYPHGLIATGGNDHNICIFSLDSPMPLYILKGHKNTVCSLSSGKFGTLLSGSWDTTAKVWLN
DKCMMTLQGHTAAVWAVKILPEQGLMLTGSADKTVKLWKAGRCERTFSGHEDCVRGLAILSETEFLSCAN
DASIRRWQITGECLEVYYGHTNYIYSISVFPNCRDFVTTAEDRSLRIWKHGECAQTIRLPAQSIWCCCVL
DNGDIVVGASDGIIRVFTESEDRTASAEEIKAFEKELSHATIDSKTGDLGDINAEQLPGREHLNEPGTRE
GQTRLIRDGEKVEAYQWSVSEGRWIKIGDVVGSSGANQQTSGKVLYEGKEFDYVFSIDVNEGGPSYKLPY
NTSDDPWLTAYNFLQKNDLNPMFLDQVAKFIIDNTKGQMLGLGNPSFSDPFTGGGRYVPGSSGSSNTLPT
ADPFTGAGRYVPGSASMGTTMAGVDPFTGNSAYRSAASKTMNIYFPKKEAVTFDQANPTQILGKLKELNG
TAPEEKKLTEDDLILLEKILSLICNSSSEKPTVQQLQILWKAINCPEDIVFPALDILRLSIKHPSVNENF
CNEKEGAQFSSHLINLLNPKGKPANQLLALRTFCNCFVGQAGQKLMMSQRESLMSHAIELKSGSNKNIHI
ALATLALNYSVCFHKDHNIEGKAQCLSLISTILEVVQDLEATFRLLVALGTLISDDSNAVQLAKSLGVDS
QIKKYSSVSEPAKVSECCRFILNLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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