NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS35435.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35435.2 Public Homo sapiens X PNMA3 24 110 108 CCDS HistoryNCBI Gene:29944Re-query CCDS DB by CCDS ID:35435.2Re-query CCDS DB by GeneID:29944See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 35435.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000424805.1 ENSP00000390576.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000424805.1Link to Ensembl Protein Viewer:ENSP00000390576.1Re-query CCDS DB by Nucleotide ID:ENST00000424805Re-query CCDS DB by Protein ID:ENSP00000390576
Original member Current member EBI ENST00000593810.3 ENSP00000469445.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000593810.3Link to Ensembl Protein Viewer:ENSP00000469445.1Re-query CCDS DB by Nucleotide ID:ENST00000593810Re-query CCDS DB by Protein ID:ENSP00000469445
Original member Current member NCBI NM_013364.6 NP_037496.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_013364.6Link to Protein Sequence:NP_037496.4Re-query CCDS DB by Nucleotide ID:NM_013364Re-query CCDS DB by Protein ID:NP_037496Link to BLAST:NP_037496.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_037496.4 463 Q9UL41-1 463 100% 0 0

Chromosomal Locations for CCDS 35435.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 153057056 153058447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1392 nt):
ATGCCGTTGACCTTGTTACAGGACTGGTGTCGGGGGGAACACCTGAACACCCGGAGGTGCATGCTCATCC
TGGGGATCCCCGAGGACTGTGGCGAGGATGAGTTTGAGGAGACACTCCAGGAGGCTTGCAGGCACCTGGG
CAGATACAGGGTGATTGGCAGGATGTTTAGGAGGGAGGAGAACGCCCAGGCGATTCTACTGGAGCTGGCA
CAAGATATCGACTATGCTTTGCTCCCAAGGGAAATACCAGGAAAGGGGGGGCCCTGGGAAGTGATTGTAA
AACCCCGTAACTCAGATGGGGAATTTCTCAACAGACTGAACCGCTTCTTAGAGGAGGAGAGGCGGACCGT
GTCAGATATGAACCGAGTCCTCGGGTCGGACACCAATTGTTCGGCTCCAAGAGTGACTATATCACCAGAG
TTCTGGACCTGGGCCCAGACTCTGGGGGCAGCAGTGCAGCCTCTGCTAGAACAAATGTTGTACCGAGAAC
TAAGAGTGTTTTCTGGGAACACCATATCCATCCCAGGTGCACTGGCCTTTGATGCCTGGCTTGAGCACAC
CACTGAGATGCTACAGATGTGGCAGGTGCCCGAGGGGGAAAAGAGGCGGAGGCTGATGGAATGCTTACGG
GGCCCTGCTCTCCAGGTGGTCAGTGGGCTCCGGGCCAGCAATGCTTCCATAACTGTGGAGGAGTGCCTGG
CTGCCTTGCAGCAGGTGTTCGGACCTGTGGAGAGCCATAAAATTGCCCAGGTGAAGTTGTGTAAAGCCTA
TCAGGAGGCAGGAGAGAAAGTATCTAGCTTTGTGTTACGTTTGGAACCCCTGCTCCAAAGAGCTGTAGAA
AACAATGTGGTATCACGTAGAAACGTGAATCAGACTCGCCTGAAACGAGTCTTAAGTGGGGCCACCCTTC
CTGACAAACTCCGAGATAAGCTTAAGCTGATGAAACAGCGAAGGAAGCCTCCTGGTTTCCTGGCCCTGGT
GAAGCTCCTGCGTGAGGAGGAGGAATGGGAGGCCACTTTAGGTCCAGATAGGGAGAGTCTGGAGGGGCTG
GAAGTAGCCCCAAGGCCACCTGCCAGGATCACTGGGGTTGGGGCAGTACCTCTCCCTGCCTCTGGCAACA
GTTTTGATGCGAGGCCTTCCCAGGGCTACCGGCGCCGGAGGGGCAGAGGCCAACACCGAAGGGGTGGTGT
GGCAAGGGCTGGCTCTCGAGGCTCAAGAAAACGGAAACGCCACACATTCTGCTATAGCTGTGGGGAAGAC
GGCCACATCAGGGTACAGTGCATCAACCCCTCCAACCTGCTCTTGGTAAAGCAGAAGAAACAGGCTGCAG
TTGAGTCGGGAAACGGGAACTGGGCTTGGGACAAGAGCCATCCCAAGTCCAAGGCCAAGTAG

Translation (463 aa):
MPLTLLQDWCRGEHLNTRRCMLILGIPEDCGEDEFEETLQEACRHLGRYRVIGRMFRREENAQAILLELA
QDIDYALLPREIPGKGGPWEVIVKPRNSDGEFLNRLNRFLEEERRTVSDMNRVLGSDTNCSAPRVTISPE
FWTWAQTLGAAVQPLLEQMLYRELRVFSGNTISIPGALAFDAWLEHTTEMLQMWQVPEGEKRRRLMECLR
GPALQVVSGLRASNASITVEECLAALQQVFGPVESHKIAQVKLCKAYQEAGEKVSSFVLRLEPLLQRAVE
NNVVSRRNVNQTRLKRVLSGATLPDKLRDKLKLMKQRRKPPGFLALVKLLREEEEWEATLGPDRESLEGL
EVAPRPPARITGVGAVPLPASGNSFDARPSQGYRRRRGRGQHRRGGVARAGSRGSRKRKRHTFCYSCGED
GHIRVQCINPSNLLLVKQKKQAAVESGNGNWAWDKSHPKSKAK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH