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Report for CCDS35971.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35971.1 Public Mus musculus 10 Plppr3 23 108 98 CCDS HistoryNCBI Gene:216152Re-query CCDS DB by CCDS ID:35971.1Re-query CCDS DB by GeneID:216152See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35971.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000092325.10 ENSMUSP00000089979.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000092325.10Link to Ensembl Protein Viewer:ENSMUSP00000089979.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000092325Re-query CCDS DB by Protein ID:ENSMUSP00000089979
Original member NCBI NM_181681.2 NP_859009.2 Updated not alive Link to Nucleotide Sequence:NM_181681.2Link to Protein Sequence:NP_859009.2Re-query CCDS DB by Nucleotide ID:NM_181681Re-query CCDS DB by Protein ID:NP_859009
Current member NCBI NM_181681.3 NP_859009.2 Accepted alive Link to Nucleotide Sequence:NM_181681.3Link to Protein Sequence:NP_859009.2Re-query CCDS DB by Nucleotide ID:NM_181681Re-query CCDS DB by Protein ID:NP_859009Link to BLAST:NP_859009.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_859009.2 716 Q7TPB0-1 716 99.8603% 0 1

Chromosomal Locations for CCDS 35971.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 79864856 79866181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 79866412 79866585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 79866668 79866725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 79866835 79867030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 79867172 79867307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 79867388 79867573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 79874020 79874094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2151 nt):
ATGCTTGCTATGAAGGAGAAGAATAAAACGCCGAAGGACAGCATGACACTCCTGCCTTGCTTTTATTTCG
TGGAGCTACCCATCGTGGCTTCCTCCATTGTGTCTCTGTACTTCCTGGAGCTGACTGACCTGTTCAAGCC
GGCCAAGGTGGGCTTTCAGTGCTACGACCGCGCCCTGTCCATGCCCTATGTGGAGACAAATGAAGAGCTG
ATCCCATTGCTCATGCTGCTGAGCCTGGCCTTCGCTGCACCTGCGGCCTCAATCATGGTCGGCGAGGGCA
TGGTCTACTGTCTGCAGTCCAGGCTCTGGGGCCGTGGTCCAGGGGGCGTGGAGGGCAGCATCAACGCTGG
TGGCTGCAACTTCAACTCCTTCCTCCGGCGCACAGTGCGCTTTGTGGGTGTACACGTGTTTGGCCTGTGT
GCCACGGCTCTGGTGACAGATGTCATCCAGCTGGCCACCGGCTACCACACACCTTTCTTCTTAACGGTCT
GCAAACCCAATTACACCCTGCTGGGCACTTCCTGTGAGTCGAACCCTTACATCACACAGGACATCTGCTC
TGGCCACGATACCCATGCCATCCTGTCAGCAAGGAAGACCTTCCCGTCCCAGCACGCCACTCTGTCAGCC
TTTGCTGCTGTCTACGTGTCGATGTACTTCAACGCGGTTATCTCGGACACCACGAAGCTGCTGAAGCCCA
TCCTTGTGTTTGCCTTCGCCATTGCTGCGGGCGTCTGCGGCCTCACACAGATCACCCAGTATCGAAGCCA
CCCTGTGGACGTCTACGCTGGCTTTCTTATCGGTGCTGGCATCGCTGCCTACCTGGCCTGCCACGCTGTG
GGCAACTTCCAGGCACCACCTGCAGAAAAGGTTCCTACCCCAGCTCCTGCCAAGGACGCCCTGCGAGCGC
TGACACAGCGGGGCCATGAGTCCATGTATCAGCAGAATAAGTCTGTCAGTACCGATGAGCTGGGCCCTCC
AGGGAGGCTAGAGGGCGTGCCTCGGCCTGTGGCTCGAGAGAAGACATCTCTTGGCAGCCTGAAGCGAGCC
AGCGTGGATGTGGACCTGCTGGCCCCACGTAGCCCCATGGGCAAAGAAGGCATGGTCACCTTCAGCAACA
CACTGCCCCGGGTCAGCACGCCCTCGCTGGATGACCCTGCACGGCGCCACATGACTATCCACGTGCCCCT
TGATGCCTCCCGTTCCAGGCAGCTTATCGGTGAGTGGAAGCAAAAATCCCTGGAGGGACGTGGCCTGGGT
CTGCCTGATGAAGCCAGCCCTGTGCATCTGAGGGCCCCAGCAGAGCAGGTAGCAGAGGAGGAAGAGGAAG
AGGAGGAGGAGGAGGAAGAAGAGGAGGAAGAGGAGGAAGAGGAAGGGCCTGTTCCACCCTCACTCTACCC
TACTGTCCAGGCTCGGCCAGGCCTTGGGCCCCGAGTCATCCTGCCTCCAAGGCCAGGGCCCCAGCCCCTC
GTACACATCCCTGAGGAAGGCGTTCAGGCTGGAGCTGGCCTGTCACCCAAGAGCAGCAGCTCATCAGTGA
GGGCCAAGTGGCTGTCAATGGCTGAGAAGGGTGGGGGCCCAGTGGCTGTGGCTCCATCCCAGCCCCGGGT
GGCCAACCCACCCAGGCTACTACAGGTCATCGCTATGTCCAAGGCGGCAGGGGGCCCCAAGGCTGAGACA
GCTTCGTCCTCCAGTGCCAGCTCCGACTCTTCCCAGTACAGGTCCCCGTCAGACCGTGACTCTGCCAGCA
TTGTTACAATCGATGCCCATGCACCTCACCATCCAGTGGTGCACCTGTCTGCTGGCAGCACACCCTGGGA
GTGGAAGGCTAAAGTAGTGGAGGGTGAGGGTAGCTATGAGCTGGGGGACCTGGCACGCGGCTTCAGAAGC
AGCTGTAAACAGCCTGGAATGGGCCCGGGGTCTCCAGTCAGTGATGTGGACCAGGAAGAACCCCGGTTTG
GGGCAGTGGCCACTGTCAACCTGGCCACTGGGGAGGGTCTGCCCCCACCAGGTGCAAGTGAAGGGGCCCT
AGGTGCAGGCAGCAGAGAATCCACCCTAAGGCGCCAGGTGGGCGGGCTGGCAGAGAGAGAAGTGGAGGCT
GAGGCAGAAAGTTATTATAGGAGGATGCAGGCCAGGAGGTACCAGGACTAA

Translation (716 aa):
MLAMKEKNKTPKDSMTLLPCFYFVELPIVASSIVSLYFLELTDLFKPAKVGFQCYDRALSMPYVETNEEL
IPLLMLLSLAFAAPAASIMVGEGMVYCLQSRLWGRGPGGVEGSINAGGCNFNSFLRRTVRFVGVHVFGLC
ATALVTDVIQLATGYHTPFFLTVCKPNYTLLGTSCESNPYITQDICSGHDTHAILSARKTFPSQHATLSA
FAAVYVSMYFNAVISDTTKLLKPILVFAFAIAAGVCGLTQITQYRSHPVDVYAGFLIGAGIAAYLACHAV
GNFQAPPAEKVPTPAPAKDALRALTQRGHESMYQQNKSVSTDELGPPGRLEGVPRPVAREKTSLGSLKRA
SVDVDLLAPRSPMGKEGMVTFSNTLPRVSTPSLDDPARRHMTIHVPLDASRSRQLIGEWKQKSLEGRGLG
LPDEASPVHLRAPAEQVAEEEEEEEEEEEEEEEEEEEEGPVPPSLYPTVQARPGLGPRVILPPRPGPQPL
VHIPEEGVQAGAGLSPKSSSSSVRAKWLSMAEKGGGPVAVAPSQPRVANPPRLLQVIAMSKAAGGPKAET
ASSSSASSDSSQYRSPSDRDSASIVTIDAHAPHHPVVHLSAGSTPWEWKAKVVEGEGSYELGDLARGFRS
SCKQPGMGPGSPVSDVDQEEPRFGAVATVNLATGEGLPPPGASEGALGAGSRESTLRRQVGGLAEREVEA
EAESYYRRMQARRYQD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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