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Report for CCDS36044.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36044.1 Public Mus musculus 10 Kera 23 108 98 CCDS HistoryNCBI Gene:16545Re-query CCDS DB by CCDS ID:36044.1Re-query CCDS DB by GeneID:16545See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36044.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000105286.3 ENSMUSP00000100923.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000105286.3Link to Ensembl Protein Viewer:ENSMUSP00000100923.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000105286Re-query CCDS DB by Protein ID:ENSMUSP00000100923
Original member Current member NCBI NM_008438.3 NP_032464.1 Accepted alive Link to Nucleotide Sequence:NM_008438.3Link to Protein Sequence:NP_032464.1Re-query CCDS DB by Nucleotide ID:NM_008438Re-query CCDS DB by Protein ID:NP_032464Link to BLAST:NP_032464.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032464.1 351 O35367 351 100% 0 0

Chromosomal Locations for CCDS 36044.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 97608781 97609669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97612809 97612975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1056 nt):
ATGGCAACCCCAAACTGTTTAATACTCTGGGTGTTACTCATAGCAGATACTGTGTGGACACAGAGTGTGA
GA
CAGGCCTATGAAATACAGGACCCAGAGGACTGGGATGTCCACGACGACTTCTATTGTCCCAGAGAATG
C
TTCTGTCCTCCCAGTTTCCCTACTGCCTTATACTGTGAGAACAGAGGTCTCACAGAAATCCCTCCTATT
CCT
TCAAGGATCTGGTACCTCTACCTGGAAAACAACCTGATTGAATCCATACCAGAGAAGCCCTTTGAGA
AT
GCCACCCAGCTGAGATGGATCAATTTAAACAAGAACAAAATAACCAACTACGGGATTGAGAAGGGGGC
C
CTGAGCCAGCTAAAGAAACTTCTTTTCCTGTTTCTTGAAGACAATGAGCTAGAGGAGGTACCTTCTCCA
TTG
CCAAGAAGTTTGGAACAATTACAATTAGCTAGAAACAAAGTATCCAGAATCCCTCAGGGGACCTTCA
GT
AATCTGGAAAACCTGACCCTTCTTGATCTGCAGCATAACAAACTATTAGACAACGCCTTTCAAAGAGA
T
ACTTTCAAGGGCCTTAAGAACCTCATGCAGTTAAATATGGCGAAGAATGCCCTGAGGAACATGCCCCCA
AGA
TTACCAGCCAACACCATGCAACTCTTTCTAGACAACAACTCCATTGAAGGAATACCTGAAAATTATT
TC
AATGTGATTCCTAAGGTGGCTTTCCTGAGGCTCAACCACAACAAACTATCAGATGCAGGTCTCCCGTC
G
AGGGGTTTTGATGTGTCATCCATTCTGGATCTTCAACTGTCTTACAACCAGCTCACAAACTTTCCCCGA
ATC
AATGCTAACCTGCAGCACCTTCACCTTGATCACAACAAAATTAAAAATGTGAACATGTCTGTAATAT
GT
CCCACCACACTGCGTGCAGAACAGGATGCCTTCATTCACGGACCACAACTGAGCTACCTGCGTCTGGA
T
GGGAATGAAATCAAGCCACCGATCCCGATAGATTTGGTGGCTTGCTTCAAGCTTCTTCAGGCTTTCATA
ATA
TAA


Translation (351 aa):
MATPNCLILWVLLIADTVWTQSVRQAYEIQDPEDWDVHDDFYCPRECFCPPSFPTALYCENRGLTEIPPI
P
SRIWYLYLENNLIESIPEKPFENATQLRWINLNKNKITNYGIEKGALSQLKKLLFLFLEDNELEEVPSP
L
PRSLEQLQLARNKVSRIPQGTFSNLENLTLLDLQHNKLLDNAFQRDTFKGLKNLMQLNMAKNALRNMPP
R
LPANTMQLFLDNNSIEGIPENYFNVIPKVAFLRLNHNKLSDAGLPSRGFDVSSILDLQLSYNQLTNFPR
I
NANLQHLHLDHNKIK
NVNMSVICPTTLRAEQDAFIHGPQLSYLRLDGNEIKPPIPIDLVACFKLLQAFI
I




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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