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Report for CCDS36435.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36435.1 Public Mus musculus 12 Zfp277 23 108 98 CCDS HistoryNCBI Gene:246196Re-query CCDS DB by CCDS ID:36435.1Re-query CCDS DB by GeneID:246196See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36435.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000069692.9 ENSMUSP00000064226.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000069692.9Link to Ensembl Protein Viewer:ENSMUSP00000064226.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000069692Re-query CCDS DB by Protein ID:ENSMUSP00000064226
Original member Current member NCBI NM_172575.3 NP_766163.2 Accepted alive Link to Nucleotide Sequence:NM_172575.3Link to Protein Sequence:NP_766163.2Re-query CCDS DB by Nucleotide ID:NM_172575Re-query CCDS DB by Protein ID:NP_766163Link to BLAST:NP_766163.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766163.2 583 E9Q6D6-1 583 100% 0 0

Chromosomal Locations for CCDS 36435.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 40315717 40315903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 40317091 40317265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 40318535 40318577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 40320602 40320698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 40322530 40322597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 40328675 40328807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 40329485 40329595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 40335284 40335375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 40363134 40363216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 40364082 40364170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 40378673 40378874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 40410576 40410953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 40445666 40445759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1752 nt):
ATGGCTGCTAGTGAGGTCCAGGGGCTTCCTGTGGACCCCCGGGAGGCTGGGGTCCGCGGGGTCCGCGGCG
GAATCGGACACACAGATCATGAAGGACATCTGGGTTCTTTCCAGCTTCTGGCTACTATAAATAAGGCTGC
TATGAACATAGTGGAGCATGTGTCCTTCTTACCAGTTGGAACATCTTCTGGATATATTGCAGCATCCTCC
GGTATTACTATGTCCAATTTTCTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAAT
CCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCACCAGCATCTGCTGTCACCTGAGTTTTT
GATCTTAGCCATTCTGACGGGTGTGAGGTGGAATCTCAGGATTGCTTTGATTTGCATTTCCCTGATGATT
AAGGATGCTGAACATTTTTTCAGGTGCTTCTCAGCCATTTGGTATTCCTCAGACAGTAAAGACTGTATCC
TGGAGCCGCTTTCCCTGCCAGAGAGTCCAGGTGGCACCACCGCTTTAGAAGGGTCTCCATCTGTGCCTTG
TATTTTCTGTGAAGAACATTTTCCCATGGCTGAACAAGACAAACTTTTGAAGCACATGATTATCGAGCAT
AAGATTGTCATAGCTGATGTGAAGCTCGTTGCAGATTTCCGAAGGTACATTTTATACTGGAGGAAAAGGT
TCACTGAACAGCCCATCACTGATTTTTGCAGCGTGATAAGAATCAATTCCACAGCTCCATTTGAGGAACA
AGACAACTATTATTTGTTATGTGATGCATTACCAGAAGATAGAATCCTCAGAGAAGAGCTTCAAAAACAC
AAACTGAAAGAAGTTCTGGATCAGCAACAGCGAGAGCGAAATGATACAAGCTTTCATGGTGTGTGCATGT
TTTGCAGTGAGGAATTTCGCGGAAACAGATCTGTACTGTTGAACCACATGGCCAGAGAACATGCTTTCAA
CATTGGTTTGCCAGACAACATTGTAAATTGCGCTGAATTCCTATGCACATTGCAAAAGAAACTGGACAAT
TTACAGTGTTTGTACTGTGAGAAGACCTTCAGAGACAAAAACACCCTTAAAGATCACATGAGAAAAAAGC
AGCATCGTAGGATCAATCCAAAAAACAGAGAATATGACCGATTCTATGTCATCAATTACTTGGAACTCGG
GAAGTCATGGGAAGAGGTGCAGTCAGAAGACGACCGCGAGCTGCTGGACCTTCAGGAAGACGACTGGTCT
GATTGGCAGGAGTACCCAGTCTCTGCTGTGTGTCTCTTTTGTGAAAAGCAAGAGGAGACAATAGATAAAC
TCTATGTGCACATGAAGGACACACATGAGTTTGATCTCCTCAGAATAAAGTCAGAGCTTGGATTAAATTT
CTATCAGCAAGTGAAGCTGGTCAATTTCATTAGAAGGCAAGTTCACCAATGCAAGTGCTACAGTTGCCAT
GTAAAGTTCAAATCCAAAGCAGATTTAAGGACTCACATGGAAGACACTAAACACACCTCACTGCTTCCTG
ACAGGAAGACATGGGATCAACTGGAGTATTATTTCCCCACCTATGAGAATGACACTCTCCTGTGTACACT
GTCTGACAGTGAAAGTGACCTAACAGCTCAAGAGCAAACGGAAAATGTCCCCGTCATCAGTGAAGATACG
TCCAGACTGTGTGCTTTAAAACAGAGCAGTGTTCTCAACCAATTGCTACTCCAGGGGTGCCTGGAAAACT
AG

Translation (583 aa):
MAASEVQGLPVDPREAGVRGVRGGIGHTDHEGHLGSFQLLATINKAAMNIVEHVSFLPVGTSSGYIAASS
GITMSNFLRNRQTDFQSGCTSLQSHQQWRSVPLSPHPHQHLLSPEFLILAILTGVRWNLRIALICISLMI
KDAEHFFRCFSAIWYSSDSKDCILEPLSLPESPGGTTALEGSPSVPCIFCEEHFPMAEQDKLLKHMIIEH
KIVIADVKLVADFRRYILYWRKRFTEQPITDFCSVIRINSTAPFEEQDNYYLLCDALPEDRILREELQKH
KLKEVLDQQQRERNDTSFHGVCMFCSEEFRGNRSVLLNHMAREHAFNIGLPDNIVNCAEFLCTLQKKLDN
LQCLYCEKTFRDKNTLKDHMRKKQHRRINPKNREYDRFYVINYLELGKSWEEVQSEDDRELLDLQEDDWS
DWQEYPVSAVCLFCEKQEETIDKLYVHMKDTHEFDLLRIKSELGLNFYQQVKLVNFIRRQVHQCKCYSCH
VKFKSKADLRTHMEDTKHTSLLPDRKTWDQLEYYFPTYENDTLLCTLSDSESDLTAQEQTENVPVISEDT
SRLCALKQSSVLNQLLLQGCLEN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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