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Report for CCDS36752.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36752.1 Public Mus musculus 13 S100z 23 108 98 CCDS HistoryNCBI Gene:268686Re-query CCDS DB by CCDS ID:36752.1Re-query CCDS DB by GeneID:268686See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 36752.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022186.4 ENSMUSP00000022186.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022186.4Link to Ensembl Protein Viewer:ENSMUSP00000022186.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000022186Re-query CCDS DB by Protein ID:ENSMUSP00000022186
Original member Current member NCBI NM_001081159.1 NP_001074628.1 Accepted alive Link to Nucleotide Sequence:NM_001081159.1Link to Protein Sequence:NP_001074628.1Re-query CCDS DB by Nucleotide ID:NM_001081159Re-query CCDS DB by Protein ID:NP_001074628Link to BLAST:NP_001074628.1

Chromosomal Locations for CCDS 36752.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 95477301 95477459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95478515 95478655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (300 nt):
ATGCCCACCCAGCTGGAGATGGCTATGGACACCATGATTCGCATCTTCCACCGGTACTCTTGCAAGGAGG
GCGACAGGTTCAAGCTCAACAAGGGGGAACTGAAGATGCTGTTACAGCGAGAACTCACAGAGTTCCTCAC
ATGCCAAAAGGATCCCCAGTTGGTGGATAAGATAATGCAGGACCTGGACGCCAATAAAGACAACGAAGTG
GATTTTAATGAGTTTGTGGTCATGGTGGCAGCTCTGACGGTTGCGTGTAACGATTACTTTGTAGAGCAAA
TGAAGAAGAAAGGCAAATAA

Translation (99 aa):
MPTQLEMAMDTMIRIFHRYSCKEGDRFKLNKGELKMLLQRELTEFLTCQKDPQLVDKIMQDLDANKDNEV
DFNEFVVMVAALTVACNDYFVEQMKKKGK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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