NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS36950.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36950.1 Public Mus musculus 14 4930578I06Rik 23 108 98 CCDS HistoryNCBI Gene:67750Re-query CCDS DB by CCDS ID:36950.1Re-query CCDS DB by GeneID:67750See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36950.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022532.5 ENSMUSP00000022532.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022532.5Link to Ensembl Protein Viewer:ENSMUSP00000022532.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000022532Re-query CCDS DB by Protein ID:ENSMUSP00000022532
Original member Current member EBI ENSMUST00000224600.1 ENSMUSP00000152904.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000224600.1Link to Ensembl Protein Viewer:ENSMUSP00000152904.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000224600Re-query CCDS DB by Protein ID:ENSMUSP00000152904
Original member Current member NCBI NM_026359.4 NP_080635.2 Accepted alive Link to Nucleotide Sequence:NM_026359.4Link to Protein Sequence:NP_080635.2Re-query CCDS DB by Nucleotide ID:NM_026359Re-query CCDS DB by Protein ID:NP_080635Link to BLAST:NP_080635.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080635.2 298 Q80ZQ3 298 100% 0 0

Chromosomal Locations for CCDS 36950.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 63971225 63971464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 63973121 63973536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 63986085 63986277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 63987700 63987747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (897 nt):
ATGGCACTCCTAACACCCCAGGGAGTGAAGGAAGTCTTCCAGTTTCAGAAACCCCAGGGGCGACAGCACC
TGCGGAGGCTCCTGAACTGGGAGGAGTTTGATGAGCTGAGGGATGCGCGCCAGAGCATACTGCTGGACAC
CCTCTATGACAGCGTCATCTTTGCTGTGGGCAAAGGCTTCCCATGGGTCGAGGTGGTCCAGGTGGTCAAG
TTCACAGAAGAGCTGCTCAAGGAAACCAAAGGCTGCTCCATCACAGAGGCTGTGACAATACTGGGGAAGA
AGCTCCGAGATTACCAGAAGCAGTTTAATGTCACCCACCTGCTGGCCCTCTGTGACTATTCCCATAACAC
TTTCATCAGACACTATAGACTCTACCAGTATGTCCTGAGCCAGGATCAGGAGGTCAACCTGACAGTCGCT
CATGAGCAAATATGTGCACCACCCCAGCCCCTTCCACTGACGGATGGCACAGACAGGGATGTGTGGAGGC
ATGAGCAGCAGGTAGCTGAGCTGAGCACGGCTGAGGTGGAGAAGCGCGCAAATGTGCTGATGCTGAAGGA
GACGCTGCGCATGGAGCAGGCACAGATGCTGCAGAAGGCCTTTGGGGTTGAGGAGGCTCCAGGGCAGCTG
CAGCCCCATCCAACCCTGAGGAAAGAGGCTCTGGAGCGTCTGGTCAGTGAAGCCATCCATATCCAGATTG
CATGCCTGCAGGAGCTTCTACAGTACGAGATCCAGGCAGCCTTTGACATCCTGGACCTGAGGCTGCAGAA
GAAAACACTCAGTCTCAGTGCTCCTCCACCCCCGCTTCCCTGTATCACCACTGGACCAGCAGCCTTAGAG
GACTCTCCCAAGGCTAGTAAGGCCAATAAAGGAAAGAAAGCCAAAGCTAAGAAGTAG

Translation (298 aa):
MALLTPQGVKEVFQFQKPQGRQHLRRLLNWEEFDELRDARQSILLDTLYDSVIFAVGKGFPWVEVVQVVK
FTEELLKETKGCSITEAVTILGKKLRDYQKQFNVTHLLALCDYSHNTFIRHYRLYQYVLSQDQEVNLTVA
HEQICAPPQPLPLTDGTDRDVWRHEQQVAELSTAEVEKRANVLMLKETLRMEQAQMLQKAFGVEEAPGQL
QPHPTLRKEALERLVSEAIHIQIACLQELLQYEIQAAFDILDLRLQKKTLSLSAPPPPLPCITTGPAALE
DSPKASKANKGKKAKAKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH