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Report for CCDS36962.2 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
36962.2 |
Public |
Mus musculus |
14 |
Cdca2 |
23 |
108 |
98 |
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Public Note for CCDS 36962.1 |
The coding region has been updated to extend the N-terminus to one that is more supported by available conservation, transcript and protein data. |
Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Reviewed (by RefSeq, Havana and CCDS collaboration) Sequence IDs included in CCDS 36962.2
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000150006.8 |
ENSMUSP00000117847.2 |
Accepted |
alive |
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EBI |
ENSMUST00000163100.7 |
ENSMUSP00000127571.1 |
Accepted |
alive |
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NCBI |
NM_001110162.1 |
NP_001103632.1 |
Accepted |
alive |
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NCBI |
NM_175384.4 |
NP_780593.3 |
Accepted |
alive |
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Chromosomal Locations for CCDS 36962.2
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2949 nt): ATGGATGCGAGTTCACACGACAAGCCTCTCTCTGAATCCAAGGAGTGTGTCCTTAATAATTCTGAAAATG ACGTTTTTAGATTGGGAACTGAACCGTTTGTGACTCCTCAGAAGCATGTAGCAGATGCGACTCCTAATCT TTGCACCCCTGATACCTTTAAGTCACCTTTGGACTTCACCACAGTAACCGTAGAGCAGTTGGGAATTACA CCTGAAAGCTTTGTTAAGACCTCTTCCGGAAAGTCAACATCTTCCCTTCAGAAGGCCAGGCGCCGCTCCA CTGTTGGTGTGCGGGGCTCTCCAGAAACCAATTGCCTGATCCGATTCATTGCCCAGCAGCGAAACCTAAA GAAGGCTGTGCTCTCTCCGTTGGCACGAGAGCCCCACTTCGAGGGTAGCCCAAGACTGTATCGAAATGCC AGTGTTTTAAGAGAGCGAATGTCTGCTTTTCGGTCAGCTTTTCACTCCATACAGGAAACTAAGATGGCCA GCAGTCCCTCAGCAGCAGAGGCAGACGGAGAGTCTAGGATATCAGATTTGACCAGAAAAGAAGATCTTCT TGAATATCAGCAGTCTGGGTTCCCTGTAAACTCCTCTTCAAAGCGGAGGAGAATATCCTCCCAGGACAGC CCTGACAATTATCTCAGTGGCACCAAAGCCCTTGCTGACGAAGCGTGTGCTGGGGGTGCCTCCACAGATC TTGCTGAGAAGTCACCTGACATCGGTTCCGCCCAGCCGGGATGCATGGCTGCTCCCCTTCCAGAGCTCAG GGAGACTTCCCAGGGACTTGCAGTGACTGACTGTGTAGAGGGCCCTGTAACACCACTGAGCTCAGGCACA GCCACTGCCACCAGGTCTCCAGAGACTCCTATGTGCGGGAGCAGCAGCCCCTCCGCTAAGACCACCGCCA CCAGGTCTCCAGCGACTCCTGTATGTGGAAGCAGCACCCCCTCCGCTAAGACCTTTGTGCTTCGTTCTGT GTTGAAGAAACCTGGTAAGCTGTTCTCAGAGAATGGAAAGGAATCCAACCTCTGTGATGACGGGGCTCAT CTGATCTCATATCCTTCAAACTCTTGCAAGGAAGGAAGAGCAGGTAGAGAAAACTGTAAAACACCAGGCT GTCTGAATCCGAGGAAGAGGAAGAGAGTTACTTTTGGAGAGGACTTAAGCCCTGAAGTGTTTGATGAGTC TTTACCAGCCAATACTCCATTGTGCAAAGGAGGAACACCTGTTCGCCCAAGGACCGTAAAAACTACCAGT CCCCTGCAGTCCCCCGTTCATGAGCAGTTTCTTCAGCCAAACTTTGATGACAAGGAGGAGAACCTTGAAA ACATAGAGCCACCTCAGGGATCATTTGCAAATCTGAGTCTTAGTAAATCCTCACTCTCTGAGACTCCTCC AGGCACTAACACTTGCAGTTCTTTAAATAAAGATGAAGAAATAATCTGCAGTATTGTTAGACCTACACGG ACCTCTCAAAGAAGAAAGCAGACGCTGAGTTCTACAGGTGTTTGCAGCTCATATACTACACAAGCTGAGC CCCGTAAAGAGAAGATGAGCAGGAGGAAATCTCGAGAAAAAAAGCACACAAGCGCGGCACTTCCTAAAAA GAAACAGGTTTTAAAAAGTTACAGAAAAAAGAAAAAGGGGAAAAAAGATGTTGAAAAATGCTTTTATGGG CCAAGAGACATTGCATCGAAGAAGCCACTCCTGAGCCCTATTCCTGAGCTGCCTGAAGTCTCTGAAGCGA CTCCTCTGGCTGACTGCACGCAGGGGACGAGCTCAGATGATTTCAACAAATGTGGTCAGCTGGAAGAAGT GAACTCGTTTGAAATTCCCACACAACGGAAGAGACGCTTACCACAGAAGGCAGATTCGCCTGAGCTGGAC CCAGCTCATCATCAGTCTCAGGTCTCTGACAAGTGCTGCTACCTGTTGCCTCTCACTACTGCTTCTGAGC GAGGGCCAAATGCCAGTACCAGAGACACAGGCAGTGAAGGGAACACCAGAGCGGAGAGTAAGTGTCAAAG TGCAAAGGAGCCAAAACCCGGGACCAAGATGGAAAGCGGTCTTGTGCCTCGGGCTTCTGTGACCCAAGAT CACATCGTGTCCAAGAATCCAAAACCTCTGGGCAGCCCTCAGAGCCAGGACCTTTTCAAGGCTGGTCAAA ATTTGGAAAATCCTTGTGAGATCCTTATTGTTTCAGAAAGTATGAATCTAAAGTGTGAGAAAGAGAGTGA ATGCTTAGCTCCACAGGGGAGTCTGCAGGGCAGCCCTGTCTCTACTGACTCAAAAAGAGACCTTAACTGT TCAGAAGATGTCCTCATTCAAAATATAAAAGAACCCGCAAGCCACAGTGAGAATGTGGGAAGGAAATGTG CAGGGAATGGCAGCCCTGGCAGTGGGAGAGAGAGGAAATGGAGAAGACGCACAGTGTGTTGTGGGGGTCA GAGTTCATACCTGGAACAAAATGGGAACCCTGCGTCTTCCTGCAGTGGGGAAAACTTTGTGGAAATTAGT TTAGAAAGCGTGCAGCTGATTGAAGAGCTGTCTAACACCATAGAGCAAAGCTTTCAGAGAACAAGCAGTA AAACCAAGGTGAGACGCAGCACAAGGCTCCAGAGAGACTTGGAAAATACAGGGCTTGTGTGGCTGTCTCC AAGTCCTTCCACTTTGCAGAAGCCCAGAAGGAGAATGACGATCTGCACCTTAGACAGCAGGGGATTTGAA TGTCCATCCTCCAAAGAAGAGACCATATCCTCAGGACAAAACCCAGGGCCGCTGCCCGCTGTCTCGGGCA GTGAGAGCCAGGGTGTTGGTTCTTCTGCGCTACCTAGGAAGAGGAGAAGCCTTTGTGGGTCTACCCTCAC AGATGCTAACAGTGCCACCCAGCCACCAGACTGCAAGAGAAAACCCTCGCTCAAGGGAGAAAGCGCTCAG CTGCCCTGA
Translation (982 aa): MDASSHDKPLSESKECVLNNSENDVFRLGTEPFVTPQKHVADATPNLCTPDTFKSPLDFTTVTVEQLGIT PESFVKTSSGKSTSSLQKARRRSTVGVRGSPETNCLIRFIAQQRNLKKAVLSPLAREPHFEGSPRLYRNA SVLRERMSAFRSAFHSIQETKMASSPSAAEADGESRISDLTRKEDLLEYQQSGFPVNSSSKRRRISSQDS PDNYLSGTKALADEACAGGASTDLAEKSPDIGSAQPGCMAAPLPELRETSQGLAVTDCVEGPVTPLSSGT ATATRSPETPMCGSSSPSAKTTATRSPATPVCGSSTPSAKTFVLRSVLKKPGKLFSENGKESNLCDDGAH LISYPSNSCKEGRAGRENCKTPGCLNPRKRKRVTFGEDLSPEVFDESLPANTPLCKGGTPVRPRTVKTTS PLQSPVHEQFLQPNFDDKEENLENIEPPQGSFANLSLSKSSLSETPPGTNTCSSLNKDEEIICSIVRPTR TSQRRKQTLSSTGVCSSYTTQAEPRKEKMSRRKSREKKHTSAALPKKKQVLKSYRKKKKGKKDVEKCFYG PRDIASKKPLLSPIPELPEVSEATPLADCTQGTSSDDFNKCGQLEEVNSFEIPTQRKRRLPQKADSPELD PAHHQSQVSDKCCYLLPLTTASERGPNASTRDTGSEGNTRAESKCQSAKEPKPGTKMESGLVPRASVTQD HIVSKNPKPLGSPQSQDLFKAGQNLENPCEILIVSESMNLKCEKESECLAPQGSLQGSPVSTDSKRDLNC SEDVLIQNIKEPASHSENVGRKCAGNGSPGSGRERKWRRRTVCCGGQSSYLEQNGNPASSCSGENFVEIS LESVQLIEELSNTIEQSFQRTSSKTKVRRSTRLQRDLENTGLVWLSPSPSTLQKPRRRMTICTLDSRGFE CPSSKEETISSGQNPGPLPAVSGSESQGVGSSALPRKRRSLCGSTLTDANSATQPPDCKRKPSLKGESAQ LP
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