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Report for CCDS37054.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37054.1 Public Mus musculus 15 Marchf6 23 108 98 CCDS HistoryNCBI Gene:223455Re-query CCDS DB by CCDS ID:37054.1Re-query CCDS DB by GeneID:223455See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37054.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000090227.5 ENSMUSP00000087694.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000090227.5Link to Ensembl Protein Viewer:ENSMUSP00000087694.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000090227Re-query CCDS DB by Protein ID:ENSMUSP00000087694
Original member NCBI NM_172606.2 NP_766194.2 Updated not alive Link to Nucleotide Sequence:NM_172606.2Link to Protein Sequence:NP_766194.2Re-query CCDS DB by Nucleotide ID:NM_172606Re-query CCDS DB by Protein ID:NP_766194
Current member NCBI NM_172606.3 NP_766194.2 Accepted alive Link to Nucleotide Sequence:NM_172606.3Link to Protein Sequence:NP_766194.2Re-query CCDS DB by Nucleotide ID:NM_172606Re-query CCDS DB by Protein ID:NP_766194Link to BLAST:NP_766194.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766194.2 909 Q6ZQ89-1 909 100% 0 0

Chromosomal Locations for CCDS 37054.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 31459189 31459279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31461942 31462077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31465254 31465386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31467690 31467779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31469543 31469677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31471617 31471798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31475746 31475815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31478295 31478496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31480285 31480422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31482498 31482598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31482804 31482923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31484946 31485080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31485924 31485998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31486082 31486150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31486355 31486435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31488792 31488850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31490576 31490627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31492739 31492771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31494071 31494132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31496004 31496193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31498574 31498742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31500916 31500988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31502720 31502863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31505685 31505758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31509726 31509822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31530803 31530821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2730 nt):
ATGGACACCGCCGAGGAAGATATATGTAGAGTGTGTCGGTCAGAAGGAACACCTGAGAAACCTCTTTATC
ATCCTTGTGTATGTACTGGCAGTATTAAATTTATTCATCAAGAATGCTTAGTTCAGTGGTTGAAACATAG
TCGGAAAGAATACTGTGAATTATGCAAGCACAGATTTGCTTTCACACCAATTTATTCTCCAGATATGCCT
TCACGGCTACCAATCCAAGACATATTTGCTGGACTGGTTACAAGTATTGGCACTGCAATACGATACTGGT
TTCATTACACACTTGTGGCCTTTGCATGGCTGGGAGTTGTTCCTCTTACAGCATGCCGCATCTACAAGTG
CTTGTTTACTGGCTCCGTGAGCTCACTACTGACACTGCCACTAGACATGCTGTCAACGGAAAATTTGTTG
GCGGATTGCTTGCAGGGCTGTTTTGTGGTGACGTGCACACTTTGTGCGTTCATCAGCCTGGTGTGGTTAC
GAGAGCAGATAGTCCACGGGGGAGCCCCAATTTGGCTGGAGCATGCTGCTCCACCCTTCAATGCTGCTGG
ACACCACCAAAATGAGGCTCCTGTAGGAGGAAATGGTGCAGAAAACCCTGCTGCTGATCAGCCAGCTAAC
CCAGCAGGTGAGAATGCAGTTCTGGGTGAAAACCCTGATGCCCAGGACGGTCAAGCAGAAGAGGAAGAGG
AGGACAATGAGGAGGAAGATGATGCGGGTGTAGAAGATGCTGCTGATGCCAACAATGGAGCCCAAGACGA
CATGAACTGGAATGCTTTAGAGTGGGACCGGGCTGCAGAAGAGCTTACTTGGGAAAGAATGCTTGGACTT
GATGGATCACTAGTTTTCCTGGAACACGTGTTCTGGGTGGTGTCTTTAAATACATTGTTCATTCTTGTTT
TTGCATTTTGTCCTTACCACATCGGCCATTTCTCCCTTGTTGGCTTGGGGTTTGAGGAGCATGTCCAAGC
ATCTCATTTTGAAGGTCTAATCACAACGATTGTTGGATATATACTTTTAGCAATAACACTGATAATTTGT
CATGCATTGGCAACTCTTGTTAAATTTCATAGGTCTCGTCGCTTGCTGGGCGTCTGCTATATTGTGGTTA
AGGTCTCTTTGTTAGTTGTGGTAGAAATCGGAGTGTTCCCTCTCATTTGTGGCTGGTGGCTGGATATCTG
TTCTCTGGAAATGTTTGATGCTACTCTGAAAGATCGAGAGCTGAGCTTTCAGTCAGCTCCAGGGACCACG
ATGTTTCTGCACTGGTTGGTGGGAATGGTGTATGTGTTCTACTTTGCCTCCTTCATCCTGTTACTGAGAG
AGGTACTTCGACCTGGTGTCTTATGGTTTCTGAGGAATTTGAACGATCCAGATTTTAATCCAGTACAGGA
AATGATTCACTTGCCCATTTATAGACATCTCCGAAGATTTATTTTGTCAGTGATTGTCTTTGGCTCCATT
GTCCTTCTGATGCTCTGGCTTCCTATACGTATAATTAAGAGTCTCTTGCCTAATTTTCTTCCTTACAATG
TCATGCTCTACAGTGATGCTCCGGTGAGTGAGCTGTCCCTTGAGCTGCTCCTACTGCAGGTTGTCTTGCC
AGCATTGCTGGAACAGGGACACACGAGGCAGTGGCTGAAGGGGCTTGTGCGTGCATGGACTGTTACTGCT
GGATACTTGCTGGACCTTCATTCCTACTTACTGGGAGATCAGGAAGAAAACGAGAACAGTGCAAATCAGC
AGGTCAACAATAACCAGCCTGCACGAAACAATAATGCTGTTCCTGCCGGGGAAGGTCTGCATGCAGCCCA
CCAAGCCATACTCCAGCAGGGAGGACCTGTTGGCTTTCAGCCTTACCGCCGGCCTTTAAATTTCCCACTC
AGGATATTTCTGCTGATTGTCTTCATGTGCATAACATTGCTAATTGCCAGCCTCATTTGCCTTACTTTAC
CAGTATTTGCTGGCCGTTGGTTAATGTCATTTTGGACGGGGACTGCCAAAATCCATGAGCTGTACACAGC
TGCTTGTGGTCTCTATGTGTGTTGGCTAACCATAAGGGCTGTGACGGTGCTGGTGGCCTGGATGCCCCAG
GGACGAAGAGTGATTTTCCAGAAGGTTAAAGAGTGGTCCCTCATGATAATGAAGACGTTGATAGTTGCTG
TGCTGCTGGCTGGGGTCGTCCCACTGCTCCTCGGGCTCCTGTTTGAGCTGGTTATTGTTGCTCCTCTGAG
GGTCCCTCTTGATCAGACTCCCCTTTTCTACCCTTGGCAGGACTGGGCGCTGGGAGTGCTGCATGCCAAA
ATTATCGCAGCTATAACTCTTATGGGTCCTCAGTGGTGGTTGAAAACTGTCATTGAACAGGTTTACGCAA
ATGGCATTCGTAACATCGACCTTCACTATATCATCCGTAAGCTGGCAGCCCCGGTGATCTCTGTGCTCTT
ACTTTCCCTGTGTGTACCGTATGTCATAGCTTCTGGCGCGGTTCCTCTACTAGGTGTTACTGCAGAGATG
CAGAACTTAGTTCACCGGCGGATTTACCCATTTTTATTGATGGTCGTTGTGCTGATGGGAATCCTGTCCT
TCCAGGTCCGCCAGTTTAAGCGCCTTTATGAACACATTAAAAATGACAAGTACCTTGTGGGGCAGCGCCT
GGTGAACTATGAGCGCAAATCCGGCAAGCAAGGCCCGTCTACACCGCCTCCGGTGTCGTCCCAAGAATAA

Translation (909 aa):
MDTAEEDICRVCRSEGTPEKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRFAFTPIYSPDMP
SRLPIQDIFAGLVTSIGTAIRYWFHYTLVAFAWLGVVPLTACRIYKCLFTGSVSSLLTLPLDMLSTENLL
ADCLQGCFVVTCTLCAFISLVWLREQIVHGGAPIWLEHAAPPFNAAGHHQNEAPVGGNGAENPAADQPAN
PAGENAVLGENPDAQDGQAEEEEEDNEEEDDAGVEDAADANNGAQDDMNWNALEWDRAAEELTWERMLGL
DGSLVFLEHVFWVVSLNTLFILVFAFCPYHIGHFSLVGLGFEEHVQASHFEGLITTIVGYILLAITLIIC
HALATLVKFHRSRRLLGVCYIVVKVSLLVVVEIGVFPLICGWWLDICSLEMFDATLKDRELSFQSAPGTT
MFLHWLVGMVYVFYFASFILLLREVLRPGVLWFLRNLNDPDFNPVQEMIHLPIYRHLRRFILSVIVFGSI
VLLMLWLPIRIIKSLLPNFLPYNVMLYSDAPVSELSLELLLLQVVLPALLEQGHTRQWLKGLVRAWTVTA
GYLLDLHSYLLGDQEENENSANQQVNNNQPARNNNAVPAGEGLHAAHQAILQQGGPVGFQPYRRPLNFPL
RIFLLIVFMCITLLIASLICLTLPVFAGRWLMSFWTGTAKIHELYTAACGLYVCWLTIRAVTVLVAWMPQ
GRRVIFQKVKEWSLMIMKTLIVAVLLAGVVPLLLGLLFELVIVAPLRVPLDQTPLFYPWQDWALGVLHAK
IIAAITLMGPQWWLKTVIEQVYANGIRNIDLHYIIRKLAAPVISVLLLSLCVPYVIASGAVPLLGVTAEM
QNLVHRRIYPFLLMVVVLMGILSFQVRQFKRLYEHIKNDKYLVGQRLVNYERKSGKQGPSTPPPVSSQE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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